Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02339 atgaaacaCCAAAAAACACTCACAAAGTTCCTCCTAAATCTAATTATACTAGTAACTATCCTACTCCTTTCAACAACATGTACCATAGCACAAGAAATTGAGGATGAGAGTCATTTTGATTACATAAAAGGAAGTGAAAAGGGTCCTTCACATTGGGGTGAACTGAAGGAGGAATGGGCAGCATGTAAAAATGGGAGATTGCAATCTCCAATTGATTTGTCAAGTCATAGAGTGAAGGTAGTGCCAAAGTTAGGAAAATTAAAGAAATACTATAAGCCTCAAAATGCTACTATCAAAAACAGAGGTCATGATATTGAGCTGAAATGGGAGGGAGATGCAGGATCAATAAATATCAATGGGACACAGTTTTTTCTACATCAAGCCCACTGGCACTCACCTTCTGAACACACCCTCAATGGCAGGAGGTATGACCTGGAGGCACACTTGGTTcatgaaagtaaaaaaataaacggTAAGAGCAAGATAGCTGTTATTGGACTTCTGTACAAGTTTGGTCGACCAGATCCTCTTCTCACCAAGttatcaaaatacataaaaagcATGGTGGATACTGAAGCAGAAAAGAGCATTGGGGTGATTGATCCCTCAGAAATGAAGCTGCGTGGCAAGAAGTATTACAGATACATGGGTTCCCTCACTGTCCCTCCTTGCACTGAAGGTGTCATTTGGACTATTAATAGGAAGATAACAAGTGTGTCTAGAGCACAAGTGAAGTTATTGAGGGAGGCTGTCCATGATCATGCAGCGAAGAATGCCAGACCTATACAACTCCTGAATAGAAGAAAGATACAACTCTATCGCCCAAAATCGAAGAAATGA 840 0.3869 MKHQKTLTKFLLNLIILVTILLLSTTCTIAQEIEDESHFDYIKGSEKGPSHWGELKEEWAACKNGRLQSPIDLSSHRVKVVPKLGKLKKYYKPQNATIKNRGHDIELKWEGDAGSININGTQFFLHQAHWHSPSEHTLNGRRYDLEAHLVHESKKINGKSKIAVIGLLYKFGRPDPLLTKLSKYIKSMVDTEAEKSIGVIDPSEMKLRGKKYYRYMGSLTVPPCTEGVIWTINRKITSVSRAQVKLLREAVHDHAAKNARPIQLLNRRKIQLYRPKSKK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02339 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Tsu01g02339 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Tsu01g02339 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Tsu01g02339 279 PANTHER ALPHA CARBONIC ANHYDRASE 3 12 278 - -
Tsu01g02339 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Tsu01g02339 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Tsu01g02339 279 PANTHER CARBONIC ANHYDRASE 12 278 IPR023561 GO:0004089|GO:0008270
Tsu01g02339 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Tsu01g02339 279 Gene3D Alpha carbonic anhydrase 35 279 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02339 Tsu-Chr1 25101929 25106788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02339 K01674 - gmx:100797935 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02339 01 25101929 25106788 Tsu07g03918 07 45316478 45319300 PCT