Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02276 ATGAAGGGTGAAACAGTAAATGTGACATGGCTTGGTGGATTATGGCCAGTTTCACGCAAGATTGGTTCAGATGACAAAGATGGAATTGGAATTATGGCATTTGAAGTTGCAGGGTTGATGTCAAAGGTTGTTAATTTTTGGCATTCTTTGAGTGATAATGAAGTAATGAATCTAAGAGAATGGATAGTAAATTCAGTTGGTGTTAAAATGCTTGTTTCTGATGATGAATATTTCTTAATGGAACTTACATGGAATGAGATTCTCAATAATTTTCAATCTATATCACAATCTGTTGCAAGGTTAGGTAAAAGGTGTAAGGATCCAATATATCATAGTTATGAAAGTTTTGTTCATAACCCATCTCAAAATTATGTTCAATGGTCAGGTTGGGAATATAGATTGAAAAAGATGGAGAAAAAGGTGAAGAAAATGGAAAGATTTGTTACTTCTATGTCAATTTTGTCTCAAGAGCTTGAAGTGTTAAAAGAGTGTGAACAAACTTTAAGGAGAATGAAGTTAAATCGCGACATGGTTGATAAGGCGAAATTGGTCGAGTTTCAGAAGAAGGTTATGTGGCAAAGGCAACAAGTGCAAAATGTAAGAGATTTGTCTCCTTGGAGTAGAAGTTATGACTATATTGTTAGGTTGTTAGCAAGATCATTGTTCACAATTCTTGAGAGAATCATACTTGTGTTTGGAAATAGTCATTTACCAATTGATAGCCAACAAAATGATTCCTCAAGAACAATGAACTATACTAACAATCGTCTCGTGCGCAACAATTCTTTCCCGGCTCTCAATGTCATGCAATCTTCAGTTCATCCTTCTGAGACGAATCTAAACGAACTTTTTTCAGGACCTATTGGAAGAAAGAACAAGagcaagaaaaagaagaaagtgcaACAAGTGCTTCATTCACAAGATTCATGTGAAAAGCTTCTTTCCTCAGAAGGAAAGCAATTGAAGTATATTGGATCCTTCAAAGGTTGCATATCGATTCAAAACGATTCCCACGAAGTACAGAGTTGTATTCCATCTAACGGTGGTTCTACGAGGAAAAACATCGATATCAAAACGAAACCGGTAGTTAATAAATCGTCTTTCTTCCATAGAAGTAGAGTTTATTTTAAACTATCTCTCAAGGAAAAGTTAAAGCCGGTTCCATCTACCCTCGGTGATGCAGCTTTAGCTCTACATTATGCAAATGTGATTGTACTAATAGAGAAGATAGTGTCATCATCTCGCATTAATATGATCGATGTTCGAACGAGAGACGATCTTTACAATAGGCTACCGACGACTATAAGAACAGCTCTAAGGAGTAAGCTTAAATGGTATGCCAAAGGTAAGCTTGAAACAGAATGGAAAGTGGTACTCACACAGATATTGGAGTGGTTAGCTCCACTTGCACACAACATGGTAAAGTGGCATTGTGAGAGGAATTTTGAGAAGGAACATACTAGTTTGAAAGCAAATGTTTTACTTGTACAGACTCTATACTTTGCAAATCAAGCAAAAACTGAAGGTGCAATGGTTGAACTCCTTGTTGGTCTTCATTATGTATGCAAGATTGATAAAGTGAAGTGTCTAGATCGTTTAAGAAGCAATTAG 1611 0.3563 MKGETVNVTWLGGLWPVSRKIGSDDKDGIGIMAFEVAGLMSKVVNFWHSLSDNEVMNLREWIVNSVGVKMLVSDDEYFLMELTWNEILNNFQSISQSVARLGKRCKDPIYHSYESFVHNPSQNYVQWSGWEYRLKKMEKKVKKMERFVTSMSILSQELEVLKECEQTLRRMKLNRDMVDKAKLVEFQKKVMWQRQQVQNVRDLSPWSRSYDYIVRLLARSLFTILERIILVFGNSHLPIDSQQNDSSRTMNYTNNRLVRNNSFPALNVMQSSVHPSETNLNELFSGPIGRKNKSKKKKKVQQVLHSQDSCEKLLSSEGKQLKYIGSFKGCISIQNDSHEVQSCIPSNGGSTRKNIDIKTKPVVNKSSFFHRSRVYFKLSLKEKLKPVPSTLGDAALALHYANVIVLIEKIVSSSRINMIDVRTRDDLYNRLPTTIRTALRSKLKWYAKGKLETEWKVVLTQILEWLAPLAHNMVKWHCERNFEKEHTSLKANVLLVQTLYFANQAKTEGAMVELLVGLHYVCKIDKVKCLDRLRSN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02276 536 PANTHER PLANT/T32M21-140 PROTEIN 5 529 - -
Tsu01g02276 536 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Tsu01g02276 536 Coils Coil 154 174 - -
Tsu01g02276 536 PANTHER BNAC09G50660D PROTEIN 5 529 - -
Tsu01g02276 536 Pfam Protein of unknown function (DUF668) 390 475 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02276 Tsu-Chr1 24118505 24120115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02276 - - gmx:100804666 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02276 01 24118505 24120115 Tsu01g02276 01 24118505 24120115 ECH
Tsu07g03968 07 45761221 45763526 Tsu01g02276 01 24118505 24120115 PCT