Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01989 atgCCAGGATTACCTCAATTCAGTAATGGCTCATCGCCATCGATTAATTCTCTTTCTGCCAATGGATTTTGGTCCAAGAATCGTGATGATGTTGGTTACAATCAGCTCCACAagTTTTGGAGTGAGTTGTCGCCACAAGCTCGACAGGAACTCTTGAGGATAGACAAGCAAACCCTTTTTGAGCAAGCGCGAAAAAATATGTACTGCTCCAGATGCAACGGTTTGCTTCTTGAAGGCTTTTTGCAGATCGTTATGTATGGAAAATCTTTGCAGCAAGATGGAACATGCGTTCAGTTTCCTTGTGGCAGACCTGGGggtttcaaaaatcaaaataatggTGGATCATCGATTTCCAATGGGGTTCTAGATGACATTCAAGATCCATCAGTCCATCCTTGGGGAGGTTTGACGACAACGCGTGAGGGTTCACTCACACTTATGGACTGCTACTTGTACTCAAAGTCTCTGAAGGGACTGCAAATTgTATTTGACGGCGCACGCGCTAGGGAGCGGGAAAGAGAACTGCTTTATCCCGATGCTTGTGGTGGCGGAGGCCGTGGTTGGATAAGCCAAGGAATAGTGAGTTACGGTAGAGGGCATGGGACAAGGGAAACGTGTGCCCTGCATACTGCCAGACTTTCATGTGACACACTGGTGGATTTTTGGTCGGCACTGGGTGAGGAGACAAGACAATCTCTTCTAAGGATGAAGGAAGAAGATTTTATAGAGAGACTCATGTTCAGGTTTGATAGCAAGAGGTTttgcagagattgtagaagaaATGTTATTCGAGAATTCAAGGAGCTAAAAGAACTGAAGCGCATGCGCAGAGAACCTCGTTGCACCAGTTGGTTTTGTGTTGCCGATACTGCATTTCAGTATGAGGTATCTGATGACTCAATTCAAGCGGATTGGCGCCAAACATTTGCAGATACTGTGGGATCGTATCATCACTTTGAGTGGGCTGTGGGGACAACCGAAGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGAACTAACGGATGTGTTCAAGTCAGTGGACTAGATCTCGGTGGCTTGAGTGCATGCTTCATTACCCTCCGAGCTTGGAAACTAGATGGCCGATGTACTGAGTTTTGTGTTAAAGCTCATGCATTAAAGGGCCAAGAGTGTGTACATTGCCGGCTAATTGTAGGGGATGGTTATGTTACAATTACAAAAGGAGAAAGTATAAAAAGATTCTTTGAGCATGCTGAAGAGGCGGAAGAAGAAGAGGATGATGATTTGATGGACAAAGATGGGAATGAGCTTGATGGAGAATGCACTCGTCCGCAAAAGCATGCGAAGAGCCCTGAACTTGCTCGAGAATTTCTTCTAGATGCTGCTACAGTTATATTCAAAGAGCAGGTAGAAAAGGCTTTCAGAGAAGGAACAGCACGTCAAAATGCGCATAGCATATTCGTTTGTCTTGCACTAAAATTGCTGGAGGAACGAGTTCATGTAGCATGCAAAGAGATCATTACATTAGAAAAGCAGACGAAACTTCTcgaggaagaagaaaaggaaaaacgtGAAGAAGAAGAGCGCAAAGAGAGGAAAAGAgcaaaagaaagagagaaaaaactTAGGAGAAAGGAGAGACTAAAAGGAaaggataaaaataaagaggaaAAGTGTTCAGAGTCAATTGATGTTCCTAGCTCTCCTGAAGCAACAAAGGAAGAACTGCCTGCACCTGCTGATACAGAGCAAAATAACGCTATTACATGCAGGAATTCTGTTATTGCAACGGATGAGACTAATATATCACAGGATGATTATCCTAACATCCAAGATGAAGAGTTCTCGAGTGAGTGTAGTACTTTCAGAGCACAAGACCATGCTTATGATGACTATGATGGAGACATTGCAAATGCACATGAAAGGAATGGTACTTCCAAAGTTGAACAACCGAAGTTTTATCGTCAAAGACTTAGATATAGGAAAGAGTTTCAAGTCGATATGTCTTCAAAGTGGTCTGACAGGCACCATAATGCAGTTGTTTACGAAAATGGTGGAATGGTAGGAAGATCTGAGCCAAGACACTATGGAGATAATTTTGGAACATCTTCTAGGGGAATCAGTGGTGGATTGAACAGACAATCAAAAATAAATGTTCCGAAAACCAATGGTCGTAACGTTGGTCATAAGTGTAATGACAAGTTCTATAGTTCCAACTACCGCATGagtgaaaaatatgatttcCATTCTTGCAGCTGTAGCGTGAACAATAGAATGACCAGAGGTAGTCGCGAGATGAAAGCCACTAGTGTGTCTGAATCTGCTGTAGATGCATCTAGGCAGTTTTATCGTGGTAGTAAGTATAATCAGGGAGACTTAATGCATGAGAGTAGCGGAAGACCCAAAAGCAGAGTCTTCTCAGGGAACTATCCAAGTAGGGATATGCTTCAATCAAAGAAAGTTTGGGAGCCTACAGAATCGCTCAATAAGTATGCACGTAGTAATTCAGACTCTGATGTTACATTGAGGTCCACAGGTCAAGTATTACAGACATTCGATCCAGCCAGGTCACCTGTTGATGAAGTTGGTGATTCAGGTGAAATTGACAATGATGATAGTGATTTGAAGAGTAGTGGAATCACTCAAGGTTGTCAAAATGATCTTGATGCAGAAGCTGAAGGATCTTGCAGCTCCACAGAAATTGGATCCGAGGAACCTGAAATAAGTCCGACGAGGAGATCAGCCATGAATAATTCTTCTGATCGCAGTCAAGGTAGCATTTCTAGTTCCGATAACTGCTCATCATGCCTAAGTGAGGGCGATAATAATACAACCTCTTCAAACCGTGAAAATACAGAATTCTCaaattcagattctgaagatGCTAGCCAAAAATATGAAGTAACAGATAGTTCAACCTGTGTTGACAATGGTGTGTCTGGCTGTTATGAACCTGAGATCGAGAAAACTCATAATGCAAATGGTGAGGGTTTGTCAAGCAGGTCACTATCTGTTCCGTCCTTGGATGCAGCAGAAAGTGAAGCGTTTGGGAGTCCTGTGTTAGAAACTgcccaaagttttgaaaatggtttttcttttGCCAATGTATGTTCTCAAGCTGAAAGCATTCTACCTCCAATGCCAAACCGAAACATACAATTTCCTGTGTTTCAGACCCCTTCAGCGATGAGTTACTACCATCAAAACCCAGTTTCATGGCCAGCTGCTCCCGCTAATGGTTTGATGCCCTTTGTACACCCAAATCACTATTTATATGCTGGCCCTCTTGGATATAACTTGAATGAGGACCCTCGGTTCTGCTTGCAGTATGGTTCCTTACAGCAACCAACACCCCAATTTAACCCTGCTGCAATTCCAGTTTATCATCCAGTTGCCAGAACAAACGGCTTAAATGGAGAGGAACTGAGTCAAATTTCTAAGCCGGCATCCATGCAAGAGCGTTTTAATGAATCTATGGCAGAAAGGGTTGTTCCAGTTTCAGCTAATTCAAGAAAAGGGCTGAATGGGGAAGGCCAACGTGGCAATTCTGCCAAGTCACAAGATAGTAACGGTGGGTTTTCCTTGTTTCATTTTGGTGGGCCTGTAGCATTTTCAAATGAACGCAAAACGGCTACTGCATCTTCAGAAAATGTTGGAGATTTCAACTCAAAAAGTTCGCCAGATCAAGTCGAAAAAGATCATGGTTGCAATAAGAAAGAGACTGCTTTCATGGAGGAGTACAACTTGTTTGCGGCGAGTAATACCTTAAGGTTTACAATTTTCTAA 3768 0.4106 MPGLPQFSNGSSPSINSLSANGFWSKNRDDVGYNQLHKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQIVMYGKSLQQDGTCVQFPCGRPGGFKNQNNGGSSISNGVLDDIQDPSVHPWGGLTTTREGSLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIERLMFRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQADWRQTFADTVGSYHHFEWAVGTTEGKSDILEFENVGTNGCVQVSGLDLGGLSACFITLRAWKLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLMDKDGNELDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKDKNKEEKCSESIDVPSSPEATKEELPAPADTEQNNAITCRNSVIATDETNISQDDYPNIQDEEFSSECSTFRAQDHAYDDYDGDIANAHERNGTSKVEQPKFYRQRLRYRKEFQVDMSSKWSDRHHNAVVYENGGMVGRSEPRHYGDNFGTSSRGISGGLNRQSKINVPKTNGRNVGHKCNDKFYSSNYRMSEKYDFHSCSCSVNNRMTRGSREMKATSVSESAVDASRQFYRGSKYNQGDLMHESSGRPKSRVFSGNYPSRDMLQSKKVWEPTESLNKYARSNSDSDVTLRSTGQVLQTFDPARSPVDEVGDSGEIDNDDSDLKSSGITQGCQNDLDAEAEGSCSSTEIGSEEPEISPTRRSAMNNSSDRSQGSISSSDNCSSCLSEGDNNTTSSNRENTEFSNSDSEDASQKYEVTDSSTCVDNGVSGCYEPEIEKTHNANGEGLSSRSLSVPSLDAAESEAFGSPVLETAQSFENGFSFANVCSQAESILPPMPNRNIQFPVFQTPSAMSYYHQNPVSWPAAPANGLMPFVHPNHYLYAGPLGYNLNEDPRFCLQYGSLQQPTPQFNPAAIPVYHPVARTNGLNGEELSQISKPASMQERFNESMAERVVPVSANSRKGLNGEGQRGNSAKSQDSNGGFSLFHFGGPVAFSNERKTATASSENVGDFNSKSSPDQVEKDHGCNKKETAFMEEYNLFAASNTLRFTIF 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 1155 1184 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 512 529 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 781 805 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 543 557 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 1204 1219 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 695 716 - -
Tsu01g01989 1255 Coils Coil 486 539 - -
Tsu01g01989 1255 PANTHER OS10G0105400 PROTEIN 11 1255 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 1204 1229 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 840 965 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 512 577 - -
Tsu01g01989 1255 PANTHER - 11 1255 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 1166 1184 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 885 965 - -
Tsu01g01989 1255 MobiDBLite consensus disorder prediction 695 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01989 Tsu-Chr1 20237163 20244717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01989 - - gmx:100776127 1771.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01989 01 20237163 20244717 Tsu01g01989 01 20237163 20244717 ECH
Tsu07g03501 07 41196857 41203685 Tsu01g01989 01 20237163 20244717 PCT