Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01987 ATGGCGAAATATGGCGAAGGTGACAAACGTTGGATCGTTGAAGACAGACCAGATGGAACAAACGTCCATAACTGGCACTGGTCAGAAACAAATTGTCTAGAATGGTCTAGAACCTTCTTCAACAATCTCTTCAACAACCTCAAAATCCTCGACGGTGAAGGTGGATTCTACATCGCCgtcaaaaaagttgaaaaagttGACGGTGAAGCTTATGTTAATGTTCGTAAGGGGAAAATCATTCCTGGATATGAAATCAATGTATTGATTTCATGGGAAGGTGAAGCGAGAGATTCTGATGGTAAGATCTTGCATAAGGTTAGTGGAAATGTTGAGATTCCTTATATTTCTGATGAGAATGCTGATGAGGATCCTGAAATTAGGGTTAGTGTTAAAGATGAAGGGAAAATTGGGAAAAGTATGAAGGACGCGGTTTTTGTGAAAGGGAAAGGGTTGATTTTGGAGAAAGTTAGGGTTTGGGTTGAGAGTATGTCGAAAGGTGGACCAGTTAAAGATGAGTTAGAGACTAAGAAGGTTCCGCCGCAGAAGttggtgaagaagaaggaagaggAAGGTGGTGTTGCGGTTGCGGCGGTGGCGAAGGAgaaggaaaagaagaaagaggaagggaAGAAGGGTTGTAAAACGATTAGTTTGAATGAGAAGTTTAATTGTAGGgcgaaagatttgtttgagataATGATGGATGAGAATAGATGGAAGGGTTTTACTCAGAGTAATGCAAGGATTAGTAAAGAGGTTGGTGGTGAGATTAGTATTTTTGATGGGTCTGTTACAGGGGCAAATTTGGAATTGGTGGAAGGGAAGTTGATTGTTCAGAGATGGAGATTTGGTAGCTGGCCAGATGGAATGCAATCAACGGTGAGAATTGTGTTTGAGGAACCAGAATCCGGAGTTACAGTTGTGAAGCTAACACACACTGATGTGCCAGAAGAAGACAGGTAA 963 0.3821 MAKYGEGDKRWIVEDRPDGTNVHNWHWSETNCLEWSRTFFNNLFNNLKILDGEGGFYIAVKKVEKVDGEAYVNVRKGKIIPGYEINVLISWEGEARDSDGKILHKVSGNVEIPYISDENADEDPEIRVSVKDEGKIGKSMKDAVFVKGKGLILEKVRVWVESMSKGGPVKDELETKKVPPQKLVKKKEEEGGVAVAAVAKEKEKKKEEGKKGCKTISLNEKFNCRAKDLFEIMMDENRWKGFTQSNARISKEVGGEISIFDGSVTGANLELVEGKLIVQRWRFGSWPDGMQSTVRIVFEEPESGVTVVKLTHTDVPEEDR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01987 320 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Tsu01g01987 320 Gene3D - 18 176 IPR036338 -
Tsu01g01987 320 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 320 IPR039981 GO:0001671|GO:0051879
Tsu01g01987 320 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 320 - -
Tsu01g01987 320 CDD SRPBCC_Aha1 215 319 - -
Tsu01g01987 320 Gene3D - 212 320 IPR023393 -
Tsu01g01987 320 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Tsu01g01987 320 Pfam Activator of Hsp90 ATPase homolog 1-like protein 227 319 IPR013538 -
Tsu01g01987 320 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Tsu01g01987 320 SUPERFAMILY Bet v1-like 215 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01987 Tsu-Chr1 20213420 20216450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01987 - - tcc:18599135 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01987 01 20213420 20216450 Tsu01g01987 01 20213420 20216450 ECH
Tsu07g03495 07 41157918 41160792 Tsu01g01987 01 20213420 20216450 PCT