Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01917 ATGGGTTGGAACCTCTTCTTTTGGCTTATCATTTGCTTCCCAATCAACATTGCTCTTCTCGCTTCAACTTTCTACCAGGTTTTGATTTTATATGACTTGGAAGCTGATTATATCAACCCATTTGATGCTTCATCTCGGATTAACTACTTCATTCTACCTGAGTTCATTGGACAAGGAGTGTTATGTGCTTTATGTCTCTTCACTGGTCACTGGTTCATGTTTTTGCTCAATGTTCCTATTACTTGCTATCATGCCATGCTGTATGTGAAAAGAGAGCATCTTATTGATGTTACTGAAGTGTTTAGAGTACTAAATGCCGAGAAGAAACTCCGGATAGCCAAACTTGCTTTGTACTTAATAGTCCTCATTGTCACCATCTTCAGGCTTACATTGATCGGTGTCTACTATTTAGGCCTGGAAGACGATGATGACTTGCGATATCTTTGGTAA 450 0.3911 MGWNLFFWLIICFPINIALLASTFYQVLILYDLEADYINPFDASSRINYFILPEFIGQGVLCALCLFTGHWFMFLLNVPITCYHAMLYVKREHLIDVTEVFRVLNAEKKLRIAKLALYLIVLIVTIFRLTLIGVYYLGLEDDDDLRYLW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01917 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Tsu01g01917 149 PANTHER PROTEIN CORNICHON 2 130 - -
Tsu01g01917 149 PANTHER CORNICHON-RELATED 2 130 - -
Tsu01g01917 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01917 Tsu-Chr1 19241627 19246040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01917 K20368 - gmx:100500341 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01917 01 19241627 19246040 Tsu01g01917 01 19241627 19246040 ECH
Tsu07g03410 07 40513002 40521278 Tsu01g01917 01 19241627 19246040 PCT