Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01878 ATGTTGAATGATCAAATACCTTCAACAAGCCATAGCAGAGACCataatgatgattatgatgaagGAGACCAAGAAATAAGAGAAATTCATGCCTTAACCCCACCTCATCATCCTCATACAAGACAACAATTACACAGTCACCAATCATCTATAGTTTCTATAGCTAATACAGAAGTTGCTTCAAATGAGAATTTCACAAGTATAAGTAGAGAATTCAGTGCTTTAGTTTTAGCAGGTTCAAGTATTGACCATAATAACTTAAGTCCAATGATGAGTAATATTACTAATTATAGCAATGAAAGAGAAAGTAACAATAGTAGAAGCTTTAACAATTTCTTAAGGATTAGAGAAGATGAATTGATGGAAGAGACAAACCCTTTAGCAATTGTGGCTGATAATAACCCTTTGGAGATGCTtccatcaacatcatcatcttcagGAACTATTAATGGTCATCAGAGTGAAGTGTCTGTTCAGAAGGTGAAGAAAGAAGAGGTTGAATCTAAGATAGCTGCATGGCAGAACGCTAAGGTTGCTAAGGTTAATAACAGATTCAAAAGGGAAGATGCTGTGATCAATGGTTGGGAGAATGAGCAGGTTCAGAAAGCTAATTCATGGTTGAAGAAAGTTGAGAGGAAGTTGGAGGAGAAAAGAGCAAAAGCATTGGAGAAAATGCAAAATGATGTAGCAAAAGCTCATAGGAAAGCACAAGAGAGAAGGGCATCTGCAGAGTCTAAAAGGGGTACTAAAATTGCAAGGGTTCTTGAGATTGCTAACCTTATGAAAGCTGTTGGAAGAGCTCCTTCCAAACGATCCTTCTTTTAA 825 0.3515 MLNDQIPSTSHSRDHNDDYDEGDQEIREIHALTPPHHPHTRQQLHSHQSSIVSIANTEVASNENFTSISREFSALVLAGSSIDHNNLSPMMSNITNYSNERESNNSRSFNNFLRIREDELMEETNPLAIVADNNPLEMLPSTSSSSGTINGHQSEVSVQKVKKEEVESKIAAWQNAKVAKVNNRFKREDAVINGWENEQVQKANSWLKKVERKLEEKRAKALEKMQNDVAKAHRKAQERRASAESKRGTKIARVLEIANLMKAVGRAPSKRSFF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01878 274 Pfam Remorin, C-terminal region 165 270 IPR005516 -
Tsu01g01878 274 PANTHER OS02G0116800 PROTEIN 15 273 - -
Tsu01g01878 274 PANTHER CARBOXY-TERMINAL REGION REMORIN 15 273 - -
Tsu01g01878 274 Coils Coil 200 227 - -
Tsu01g01878 274 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01878 Tsu-Chr1 18844530 18846753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01878 - - gmx:100802874 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01878 01 18844530 18846753 Tsu01g01878 01 18844530 18846753 ECH
Tsu07g03372 07 40145169 40148353 Tsu01g01878 01 18844530 18846753 PCT