Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01448 ATGGAAGAGAATAATAAGATCTTGAATGAGTACACACAAGATGGAACTGTTGATCTTAATGGAAAACCTGTTCTCAGATCAAAAACAGGTGGTTGGAAAGCTTGTTCTTTCCTTGTTGTGTATGGGATATTTGAAAGAGTAGCTTACTATGGTATATCAtcaaatttgattatatatttgACAAAGGAGCTTCACCAGGGCACTGTTACCTCTTCCAACAATGTCAACAATTGGGTTGGCACTGTTTTTATTACTCCCATATTAGGAGCTTATATTGCTGACACTCACCTTGGACGCTATAGGACTTTTGTCATTTCTTCCCTTATCTATTTACTGGGTATGTGTCTACTTACACTATCGGTCAGCCTTCCAAGCCTAAAGCCACCTGAGTGCCACGAAATGGATGTGAAAAAATGCAAAGAAGCTTCCACACTACAGCTAGTTGTGTTCTATGTTTCACTCTACATAATAGCAGTGGGAACTGGTGGAACTAAGCCAAACATTTCCACCATTGGTGCTGACCAGTTTGATGATTTTGACCCCAAACAGAAGTCACTTAAGCTCTCATTCTTCAATTGGTGGATGTCCAGCATTGTCACAGGGTCACTATTTGCATTCACAGTTATAGTGTATATACAAGATAGTGTGAGTTGGAGTCTTGGTTATGCTCTTCCAACTATAGGACTTGCAATATCAATCATCACATTCTTGGCTGGCACACCTTTCTATAGACACAAATTGCTATCAGGGAGTCCCTTCATTAGTATTGCTAAGGTCATTGTGGCAGCTACAAGGAAATGGTGTGTAGTTGTTCCTAAAGACCCAAAAGAACTATATGAGCTTAGTTTGGAAGAGTATACCAAGAAAGGGAAATTCAAGATTGATCCCACTCCTACCTTCAGGTTCCTTAATAAGGCTTGTGTGGACACTGGTTCAAGTACTAGTAATGAGTGGATGATATGCCCTATAACACAAGTAGAGGAGACAAAACAAATACTCACCTTAATCCCTATTTGGGTTGCAACATTTATTCCTAGTGCAATGATTGCTCAAATGAATACTCTTTTTGTAAAGCAGGGAACTACTCTTGACAGATCCATTGGAAACTTCAAAATTCCTCCATCAAGTTTAAATGCAATTACAATTTTGACCATGATTATGACATATATACTCTATGAACGTTTCTTTGTTAGGTATATGCAGAAGTTGACTAAGAACCCTAGAGGGATTACTCTACTTCAAAGAATGAGCATAGGATTCATTATCCATATAGTGATAATGGTAGTTTCATATATGGCTGAAAGATGTAGACTTTGTAAAGCCAAAGAACATGGGGTAATTGAAAATGGAAGACAGGTTCCATTGAGCATATTTATTTTGGCTCCTCAGTTTGTACTTATGGGAATAGCAGAAGCTCTCTTAGAGGGTGCCAAAATTGAGTATTTCTATGACCAAGCCCCCGAAAGCATGAAGAGCATTGGGACTTCATTTTCCTTAACTACCACTGGGGTTGGTAGTTTCCTAAGTTCTTCTCTTCTCACAACGGTTTCACACGTCACCGAGAAACATAGTCACAAAGGGTGGTTTTTGGACAACCTTAATGCTTGTCATCTTGATTATTACTATGCATTTTTGGCAATACTAAATGTCCtgaacttcatcttcttcatgaTTGTCTCAAAACTCTATGTCTACAGAGCTGAAGTTTCAGATTCCCTACAAGTGCTTGAAACAGAGCTAAAAGAAAGGACAACAGCTTTAAGTGTCATAACTGATATTAGAAGATAA 1788 0.3781 MEENNKILNEYTQDGTVDLNGKPVLRSKTGGWKACSFLVVYGIFERVAYYGISSNLIIYLTKELHQGTVTSSNNVNNWVGTVFITPILGAYIADTHLGRYRTFVISSLIYLLGMCLLTLSVSLPSLKPPECHEMDVKKCKEASTLQLVVFYVSLYIIAVGTGGTKPNISTIGADQFDDFDPKQKSLKLSFFNWWMSSIVTGSLFAFTVIVYIQDSVSWSLGYALPTIGLAISIITFLAGTPFYRHKLLSGSPFISIAKVIVAATRKWCVVVPKDPKELYELSLEEYTKKGKFKIDPTPTFRFLNKACVDTGSSTSNEWMICPITQVEETKQILTLIPIWVATFIPSAMIAQMNTLFVKQGTTLDRSIGNFKIPPSSLNAITILTMIMTYILYERFFVRYMQKLTKNPRGITLLQRMSIGFIIHIVIMVVSYMAERCRLCKAKEHGVIENGRQVPLSIFILAPQFVLMGIAEALLEGAKIEYFYDQAPESMKSIGTSFSLTTTGVGSFLSSSLLTTVSHVTEKHSHKGWFLDNLNACHLDYYYAFLAILNVLNFIFFMIVSKLYVYRAEVSDSLQVLETELKERTTALSVITDIRR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01448 595 SUPERFAMILY MFS general substrate transporter 26 561 IPR036259 -
Tsu01g01448 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g01448 595 Pfam POT family 100 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g01448 595 PANTHER PEPTIDE TRANSPORTER 15 575 - -
Tsu01g01448 595 CDD MFS_NPF5 32 565 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tsu01g01448 595 Gene3D MFS general substrate transporter like domains 4 571 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01448 Tsu-Chr1 13926988 13931354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01448 6 579 Organic Solute Cotransporters AT5G46040 58.854 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01448 - - gmx:100775227 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03720 07 43414314 43417268 Tsu01g01448 01 13926988 13931354 PCT