Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01444 ATGGAAGATGGGAGGGTGGTGAGTGATGAGTTCACACAAGATGGAAGTGTTAATCTTAAAGGGAAACCCATTCTCAAATCCAAAACTGGTTGTTGGAAAGCTTGTTCCTTCTTTGTTGTGTATGAGGTATTTGAGAGAATGGCTTATTATGGGATATCATCAAATTTGATCTTATATTTGATAAAGAAGCTTCATCAAGGTACTGTGACTTCTTCTACCAATGTCACCAATTGGGTTGGTACCATTTGGATCACTCCCATTTTAGGTGCTTATGTTGCTGATGCCTACCTTGGCCGCTATTGGACTTTTGTCACTGCCTCTGTTATCTATCTATTGGGTATGTCTATGCTTACACTATCAGTTTCCCTTCCAAGCCTGAAACCACCTGAGTGCCATGAAATAGATGTGACAAAATGCAAAAAAGCTTCCACACTACAACTAGCTGTATTCTATGGTGCACTCTACACTCTAGCAGTTGGAACAGGTGGAACCAAGCCTAACATTTCTACCATTGGTGCTGATCAATTTGATGAGTTTgacacaaaagagaaaaaacataaaCTCTCATTCTTCAATTGGTGGATGTTTAGCATTTTTATTGGAACCCTTTTTGCAAATTCTGTTTTAGTTTACATACAAGATAATGTTGGTTGGACTCTTGGTTATGCACTTCCAACACTTGGACTTGCAATATCTATCATCATATTTTTAGTAGGTACACCTTTCTATAGACATAAATTACCTAGAGGAAGTCCTTTCACTAAAATGACTAAGGTTATAGTGGCTGCTATAAAGAAATGGAATGTTCCTATTCCTAGTGACCCTAAAGAACTATATGAGCTTGATTTGGAAGAGTATGCAAAGAAAGGAAATGTTAGAATTGATTCCACTCCTACATTGAGGTTCCTCAACAAGGCATGTGTCAAGACTAATTCAAGTACTAGTTCATGGGTGTTATGTCCTGTCACACATGTAGAGGAGACAAAACAAATGCTAAGAATGATCCCAATCTTAGCTACTACATTAATACCAAGTACAATGATTGCTCAAATAAATACCCTTTTTGTGAAACAAGGAACTACACTTGATAGAGGCATTGGAAATTTCCAAATTCCACCAGCAAGTTTAGGTACATTTGTGACACTATCAATGCTTATAAGTGTTGTACTCTATGATCGTTTCTTTGTTAAGATTATGCAAAAATTTACTAGGAATCCTAGAGGAATTACCCTCCTTCAGAGAATGGGAATAGGAATCATAATCCATATAGTGATTATGGTTGTTGCAACTTTCACTGAAAAATATAGACTTAGTGTAGCAAAAAAACACAGTGTAGTCGAAAACGGAGGTTTGGTTCCATTAAGCATATTCATTTTGCTTCCACAATTCATACTTATGGGAACAGCTGATGCATTCTTAGAAGTTGCGAAGATCGAGTTCTTCTATGATCAAGCACCAGAAAGCATGAAGAGTCTTGGAACTTCTTATTCAATGACTAGCTTAGGCATTGGAAATTTCATTAGTACTTTTCTTCTTTCAACAGTTTCACACATCACTGAGAAACATGGTCATCAAGGGTGGATTTTGAATAATCTTAATGCTTCTCATCTTGATTACTATTATGCATTTTTGGCAATATTAAACATCTTGAACTTTATATTCTTCTTTATTGTTACAAAATTTTATGTATATAGAGCTGAAATTTCAGATTCTATAAAAGTGCTTGCAGAAGAATTGAAGGAAAAGACAAGTGCTGTGTCAAACCAAGTGATTCCAAGAGAAGTAGTACAATAG 1794 0.3567 MEDGRVVSDEFTQDGSVNLKGKPILKSKTGCWKACSFFVVYEVFERMAYYGISSNLILYLIKKLHQGTVTSSTNVTNWVGTIWITPILGAYVADAYLGRYWTFVTASVIYLLGMSMLTLSVSLPSLKPPECHEIDVTKCKKASTLQLAVFYGALYTLAVGTGGTKPNISTIGADQFDEFDTKEKKHKLSFFNWWMFSIFIGTLFANSVLVYIQDNVGWTLGYALPTLGLAISIIIFLVGTPFYRHKLPRGSPFTKMTKVIVAAIKKWNVPIPSDPKELYELDLEEYAKKGNVRIDSTPTLRFLNKACVKTNSSTSSWVLCPVTHVEETKQMLRMIPILATTLIPSTMIAQINTLFVKQGTTLDRGIGNFQIPPASLGTFVTLSMLISVVLYDRFFVKIMQKFTRNPRGITLLQRMGIGIIIHIVIMVVATFTEKYRLSVAKKHSVVENGGLVPLSIFILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFISTFLLSTVSHITEKHGHQGWILNNLNASHLDYYYAFLAILNILNFIFFFIVTKFYVYRAEISDSIKVLAEELKEKTSAVSNQVIPREVVQ 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01444 597 CDD MFS_NPF5 32 564 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tsu01g01444 597 Gene3D MFS general substrate transporter like domains 5 570 IPR036259 -
Tsu01g01444 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g01444 597 Pfam POT family 100 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g01444 597 PANTHER PEPTIDE TRANSPORTER 15 574 - -
Tsu01g01444 597 SUPERFAMILY MFS general substrate transporter 27 560 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01444 Tsu-Chr1 13895070 13905189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01444 7 578 Organic Solute Cotransporters AT5G46040 66.202 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01444 - - gmx:100813385 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03721 07 43418690 43421083 Tsu01g01444 01 13895070 13905189 PCT