Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01250 ATGATGAGGAGGCAAAAACAAGtagagaaaaaaacaaacacattcTTACTAGAAAAATCACCAACAAAAGAATACCAAATAACAGCTCCAAGTCATGATGATCAATATTATTCCAAAGTCACAACTATAGTCACAAAAAAATCACCTCCTCCAATTGAATTTCCTACTTCTCCACAACTCATATTTGGAGaagaaataattcattttaGTCATCCACAACATCCCCTCTCAATGGTGGACCTTCCTGACCTATTCATTTGTGTAGGCTGCAAAGAATATGGCTCTGGAAAAAGATTTGTTTGTCAACAATGTGATTATCAACTTCATGATTTTTGTGCTTTGGCTCCTCCTGCTCTTAAGGCTCATCCTTTTCATTCTCAACATGCAGTTTTGTTCCATTCCAAACCAGTGAAAAGTGGAATGACAAAATCCAAATGCGACGTTTGTGGCAAACTAACAAAAGGCTATACATTCCTATGCACAGCATGTGCTTTCCAAATGCATCCATGTTGTGCCATGCTCAACACTGAAATTGAATTCCCATCTCATCCACACACTCTCAAACTCACACCTTCAACCACCACGGCAACGACCGCAACAAACGTGGATAACTCCAACACGATTGTTTGCAACGAGTGCAAGAAACGAAGGTCAGGGAAAGTGTATCGGTGCACGGTGTGCAACTATAATCTTCATGCATTTTGTGCTAAGAATAAAGTTAATGGTCTTCAAGCTAATGGTATTAGGGTTCCTGaaaaaccaagtgttctttctGCTGCAGCTAAAGTTGCTTCTCAAGTTGTGATTGAATTTATTGGTGGGTTTGTTGAAGGTATTGGTGAAAATTTGGGTGAAGTTCTAATTCAAAATATTACCAAAGGAGGAAATGCCAATCACActaatacaaataataataataatacgagtacaaaacctcgtaaataa 945 0.3524 MMRRQKQVEKKTNTFLLEKSPTKEYQITAPSHDDQYYSKVTTIVTKKSPPPIEFPTSPQLIFGEEIIHFSHPQHPLSMVDLPDLFICVGCKEYGSGKRFVCQQCDYQLHDFCALAPPALKAHPFHSQHAVLFHSKPVKSGMTKSKCDVCGKLTKGYTFLCTACAFQMHPCCAMLNTEIEFPSHPHTLKLTPSTTTATTATNVDNSNTIVCNECKKRRSGKVYRCTVCNYNLHAFCAKNKVNGLQANGIRVPEKPSVLSAAAKVASQVVIEFIGGFVEGIGENLGEVLIQNITKGGNANHTNTNNNNNTSTKPRK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01250 314 Pfam C1 domain 181 236 IPR004146 -
Tsu01g01250 314 Pfam C1 domain 69 113 IPR004146 -
Tsu01g01250 314 SUPERFAMILY Cysteine-rich domain 90 185 IPR046349 -
Tsu01g01250 314 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 47 300 - -
Tsu01g01250 314 MobiDBLite consensus disorder prediction 293 314 - -
Tsu01g01250 314 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 47 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01250 Tsu-Chr1 11569349 11571849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01250 - - gmx:100815805 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01250 01 11569349 11571849 Tsu01g01250 01 11569349 11571849 ECH