Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01246 ATGGCGGAATGCGAAATCCAGAAGATAGATCCAGAAACAGAGTTTCTATTATCAAAGACAGAAACCGGAAACGAATGGGAAACCTTCAAAGAAAACGTTAGACCATTGAAAAGAGGTCGTAATGTTAACATTCTCAACAACGCTCTCAAATCTCACACCGATAATCATCTCAAGAAATCGCTTCTGAATCAACGAAGGAAACTTATTGAAGAGATTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGTTGGTGGTGATTTATGAACAATGTGTGCGTGCATTTTGGCATTCGGAACAGTATAAGGATGATTTGCGGTATCTCAAAGTGTGGCTTGAATATGCAGATAATTGCTTTGATAAGGAAGTTATATATGCTTTTTTGGATGCAAATGGAATTGGAAAAACTCATTCTGATTTCTACATTTCATATGCTTTGCACTTGGAAGTTAAGAACAAGTTTAAAGCTGCTCATCAGACATTTGAACTTGGCATATCTAGGAATGCTCAACccattgaaaaattgaaagctGCTTACAGAAAATTTCTTGTTCGCTCAATGTCAAGGACAAAACCTGTAGATGAACCAATGGATAAACAGGCACCTGTCCGTAGCTTTGGAACTCTTCTCGCAAAAGGAGAAAATGGTGCGCGGTTGGCTTCTTTGAAAAGTGATCATTCTTCAAAGAACGATAGGACTCGAGCTGCTCCACTTTCCATTTATAAAGATTCAAATGCCAGTGGTGGTGAGACCAGCCCACATCAGCCAGACCTGTCACACTCTTGGCTCAAACTTGGAGCTCGAGCTGAAAGAAACAAGGAAAACAATGCAATTCCTGCCAAATGGAAATCCTTCAAGATTCCACAGCGACCAGGGACCAGAACTGAAGTGGCTAGGGCAAGTGCCTGCATCCCGGTGTTTGTTGATGAAGAATGTCAAGATTCACTAAATCTGAAAGCAGAAGGTTGCAAGTCCTCAAGTTTGAAGATTAGGCAAGAAGATGAAAAGGACTTGAAAAGAGAAACAGAGTTACTAAGGAAGAATCCATTGCGAAATTTTCCACATTGCAGCCTTCCCAGATAA 1143 0.4051 MAECEIQKIDPETEFLLSKTETGNEWETFKENVRPLKRGRNVNILNNALKSHTDNHLKKSLLNQRRKLIEEIDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSEQYKDDLRYLKVWLEYADNCFDKEVIYAFLDANGIGKTHSDFYISYALHLEVKNKFKAAHQTFELGISRNAQPIEKLKAAYRKFLVRSMSRTKPVDEPMDKQAPVRSFGTLLAKGENGARLASLKSDHSSKNDRTRAAPLSIYKDSNASGGETSPHQPDLSHSWLKLGARAERNKENNAIPAKWKSFKIPQRPGTRTEVARASACIPVFVDEECQDSLNLKAEGCKSSSLKIRQEDEKDLKRETELLRKNPLRNFPHCSLPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01246 380 ProSiteProfiles BUB1 N-terminal domain profile. 68 227 IPR013212 -
Tsu01g01246 380 Gene3D - 19 205 - -
Tsu01g01246 380 SMART mad3_bub1_i 61 185 IPR013212 -
Tsu01g01246 380 Coils Coil 58 78 - -
Tsu01g01246 380 Pfam Mad3/BUB1 homology region 1 64 185 IPR013212 -
Tsu01g01246 380 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 23 380 IPR015661 GO:0007094
Tsu01g01246 380 PANTHER MITOTIC SPINDLE CHECKPOINT PROTEIN BUBR1 23 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01246 Tsu-Chr1 11522607 11526232 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01246 K02178 - gmx:100799090 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01246 01 11522607 11526232 Tsu01g01246 01 11522607 11526232 ECH