Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01136 ATGGAGGAAATTTTCGGCGACGGAGGTGGAGTTGCGACACCGGTGCCGCTTTCAGTGTCCGGATCGTTTAGAGAAGGAAGAGGCTCGTCGAGGAGACGCGGTTCTGCTAGACAGCCGAGTATGGATGCTGATGAGTTCATGAATTTGTTGCACGGTTCGGATCCAGTGAAGGTGGAGCTTAATCGTCTCGAGAATGAAGTTCGAGATAAGGATAGGGAATTATCAGAAGCACAAGCTGAGATTAAAGCTTTGAGGCATTCTGAACGATTAAGAGAAAAAGCTGTTGAAGAGCTATCTGAAGAGCTGTCAAAGGTTGATGGGAAGCTAAAATTAACGGAATCTCTATTAGAAAGCAAAAATCTCgaaataaagaaaatcaatGACGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCAGAAGCTACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCGATTGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTAAAGCTTGCTCGGCAAGAGATTGCTAAACTACAAGATGACAACAGAGCTTTAGATCGTCTTACCAAATCCAAAGAAGCTGCACTACTTGAAGCTGAAAAGACTGTTCAGTTTGCCATGGCTAAGGCCTCCATGGTGGATGATctccaaaacaaaaatcaagagCTGATGAAACAGATTGAGATTTGCCAGgaagaaaacaaaattttggaCAGAATGCATAGACAAAAGGTGGCAGAGGTTGAAAAGCTCACCCAAACTGTGAGGGAGCTAGAAGAGTCAGTCCTTGCAGGTGGTGCAGCAGCAAATGCAGTGAGAGATTATCAACGGAAAGTTCAAGAAATGAATgaagaaagaaaaactcTTAATAGGGAGTTGGGCCGTGCCAAGGTTACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTTATGCCTGTCAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGGGAAATGCAACAACTTCGTGATAAGCTTGCTATAGTTGAGCGCACTGCAAAATCTGAAGCACAGTTGAAAgaaaaatacCAATTACGGCTTAAAGTGCTAGAGGAGAGTTTGAGGGGCAATTCTAGTGGCAGTAGTCGCAGCATCACAGAGGGAAGAAGTATGAACAATGGTTCTTCTCGCCGCCAATCACTAGGTGGAGTTGATAATATCTCAAAACTAACCTCTAATGGATTCTTGCCTAAGAGGGCACCATCCCCTCAACTCAGGTCATCCCTATCATCTAGCACAATATTGAGGAATGCTAAAGGATCATCTAAATCTTTTGATGGTGGCTCAAGGACACTGGACAGGAGTAAAACGCTGCTAAGTGGAGCACCTCAAAGTTACTCATTCAACCAATCTCGTGAAGAAACcaaagagagagagacagaTGATAATTGGAAAGGAAATTCAGGTGATAAGCCAAATGACTTTCCACCGGCGGATACAGAGGATAGTATTCCGAGTGTTTTATATGACCTCTTGCAGAAAGAGGTCATTGCTTTGAGGAAAGCCGGTCATGAGAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAGGAAGGTGGATACATTGACCAAAGCCATGGAAGTTGAGGCGAAGAAGATGAGAAGAGAAGTAGCTGCAATGGAAAAGGAGGTAGCTGCTATGCGTGTCGATAAAGTACAAGAGAACAGAGCAAAGCGGTTCAGCAATGTAAAGGGCCCTGTAAACAGTGCTCAGAGTCAGCTTATATCTGGAAGAAATGTGACACGAGGAGGATTGACACGGAGCACCCAATAA 1842 0.4213 MEEIFGDGGGVATPVPLSVSGSFREGRGSSRRRGSARQPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELSEELSKVDGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAEKTVQFAMAKASMVDDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEESVLAGGAAANAVRDYQRKVQEMNEERKTLNRELGRAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERTAKSEAQLKEKYQLRLKVLEESLRGNSSGSSRSITEGRSMNNGSSRRQSLGGVDNISKLTSNGFLPKRAPSPQLRSSLSSSTILRNAKGSSKSFDGGSRTLDRSKTLLSGAPQSYSFNQSREETKERETDDNWKGNSGDKPNDFPPADTEDSIPSVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLARKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVDKVQENRAKRFSNVKGPVNSAQSQLISGRNVTRGGLTRSTQ 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01136 613 Coils Coil 60 87 - -
Tsu01g01136 613 Coils Coil 215 263 - -
Tsu01g01136 613 Coils Coil 95 129 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 1 43 - -
Tsu01g01136 613 Coils Coil 274 301 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 583 613 - -
Tsu01g01136 613 Pfam Microtubule-associated protein 70 44 594 IPR009768 GO:0007010|GO:0008017
Tsu01g01136 613 Coils Coil 323 357 - -
Tsu01g01136 613 Coils Coil 163 190 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 585 613 - -
Tsu01g01136 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 3 613 IPR009768 GO:0007010|GO:0008017
Tsu01g01136 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 3 613 - -
Tsu01g01136 613 Coils Coil 546 573 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 469 486 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 374 468 - -
Tsu01g01136 613 MobiDBLite consensus disorder prediction 374 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01136 Tsu-Chr1 10479472 10486158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01136 - - gmx:100800667 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01136 01 10479472 10486158 Tsu01g01136 01 10479472 10486158 ECH