Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01118 ATGGCAACCTCATCTTCTATCACACACAACAAAGAAGAGAAACAAATTGATCATGACCAAAATGTTCTGCAAAAACATGTTGCATTCTTTGATAGGAACCATGATGGCATCGTTTATCCATGGGAAACATTCCAagGATTTCGGGCAATAGGTTGTGGAATCATGTTATCGAGTGTTGCtgctattttcataaatttcgGTCTTAGTCAGAAAACTCGTCCGGGAAAGTTTCCTTCTATATTACTACcaatagaaattaaaaacatCAACAAAGCAAAACATGGAAGTGACTCTGGTGTCTATGATAGTGAAGGAagGTTTGTTCCttcaaaatttgaagaaatttttagcAAGCATGCAAAACAACACCCAAATGCTTTAACATCTGATGAATTGATGGGACTGCTAAAGGCAAATAGAGAGCCTAAGGATTACAAAGGatgGCTCGCTAGCTACACAGAATGGAAGATTTTATATGTTCTTTGCAAAGATAAGAAAGGATTACTTCACAAAGAAACCATTCGTGCTGTCTATGATGGGGGCTTGTTTGAACGTATGGAAAAGGAACactcagaaaagaaaaataaataa 591 0.3316 MATSSSITHNKEEKQIDHDQNVLQKHVAFFDRNHDGIVYPWETFQGFRAIGCGIMLSSVAAIFINFGLSQKTRPGKFPSILLPIEIKNINKAKHGSDSGVYDSEGRFVPSKFEEIFSKHAKQHPNALTSDELMGLLKANREPKDYKGWLASYTEWKILYVLCKDKKGLLHKETIRAVYDGGLFERMEKEHSEKKNK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01118 196 Pfam Caleosin related protein 19 186 IPR007736 -
Tsu01g01118 196 SUPERFAMILY EF-hand 20 173 IPR011992 -
Tsu01g01118 196 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 7 195 - -
Tsu01g01118 196 PANTHER PEROXYGENASE 3-RELATED 7 195 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01118 Tsu-Chr1 10287870 10292944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01118 14 196 Acyl Lipid Metabolism Gene Families AT1G70670 69.945 1.92e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01118 K17991 - gmx:100306686 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01118 01 10287870 10292944 Tsu01g01118 01 10287870 10292944 ECH