Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01113 ATGGAAGAAGCAGAAAAAGAGTTAGAGAGAAGAAGCAAGTTTCTAAACAGTTTGATacagaacaagaaaaaatccataaaacagccacaagaacaagaacaagaacaacatgaaaataatattaaactcAACAACATTCATGTCAGAGCTTGTGACATGTCTCTTGCTTTGCAGAAACATGCTTTCCAATGTGCACGTGACCATCTTGATTCTATGCCATCTAAGAAAGTTGACAGTAAACACTTGGCACTGGTGCTTAAGAAGGAATTTGATTCTTCTTATGGACCAGCTTGGCACTGCATTGTTGGTACTAGTTTTGGTTCCTATGTTACACACTCTCTTGGTGGTTTTTTGTACTTTTCCATTGATAAGGTTCATATCCTTCTCTTCAAGACAGTTGTTGCACCGTTGGACCATTGA 420 0.3262 MEEAEKELERRSKFLNSLIQNKKKSIKQPQEQEQEQHENNIKLNNIHVRACDMSLALQKHAFQCARDHLDSMPSKKVDSKHLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHILLFKTVVAPLDH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01113 139 PANTHER DYNEIN LIGHT CHAIN 1 138 - -
Tsu01g01113 139 MobiDBLite consensus disorder prediction 26 41 - -
Tsu01g01113 139 SUPERFAMILY DLC 42 132 IPR037177 GO:0007017|GO:0030286
Tsu01g01113 139 SMART Dynein_light_2 41 132 IPR001372 GO:0007017|GO:0030286
Tsu01g01113 139 Coils Coil 1 21 - -
Tsu01g01113 139 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 20 133 IPR037177 GO:0007017|GO:0030286
Tsu01g01113 139 PANTHER DYNEIN LIGHT CHAIN 1 138 IPR001372 GO:0007017|GO:0030286
Tsu01g01113 139 Pfam Dynein light chain type 1 46 132 IPR001372 GO:0007017|GO:0030286
Tsu01g01113 139 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01113 Tsu-Chr1 10214739 10217508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01113 K10418 - gmx:100805980 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01113 01 10214739 10217508 Tsu01g01113 01 10214739 10217508 ECH