Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01073 atgaTAACACTAAAAGATCTGTACACTGTCTTAACAGCAGTTGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCCGTCCGTTGGTGGAAGATTTTTTCGCCCGATCAATGTTCCGGTATAAACCGTTTTGTTGCGGTTTTCGCTGTCCCTCTTCTTTCCTTTCACTTCATCTCAACTAATAATCCATACCAAATGAACTTTAGATTCATAGCAGCAGACACACTTCAAAAAATCATCATGCTAATCGCGCTTTCGCTATGGACAATGTTTACTAAAAATGGTAATTTAGAATGGATGATAACAATTTTCTCATTATCAACACTTCCAAATACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTACTCTGGAAGTTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACACTTTTACTCTTTCTTTTCGAGTATCGAGGTGCTAAGCTTTTAATCATGGAACAATTTCCGGAAACTGCAGCTTCGATTGTTTCGTTTAAAGTTGATTCCGATGTTATGTCGTTAGACGGAAGGGATTTTCTTGAGACTGATGCATCTGTTGGTGATGATGGGAAATTACATGTTACTGTTAGGAAATCTAACGCGTCGCGGAGGTCATTCATGATGAATACTCCGCGACCGTCAAATTTGACTGGAGCTGAGATTTACAGTCTCAGCTCCACACCAAGAGGGTCGAATTTTAACCATCAGGAGTTTTACTCCATGATGGGCTATCAACCAAGGCATTCCAATTTTGGTACTAATGATTTGTATTCTGTTCAGTCTTCGTCTCGAGGACCGACTCCTAGACCGTCAAATTTCGAAGAACAAGGTGGAAGTTCTCCTAGATTTGGGTTTTATCCGGCGGCGCAAACTGTGCCTGCTTCGTATCCGGTGCCTAATCCTGAATTCTCCTCTACTACTAAAACTGTGAAGAGTCAGAGCCAAAATTTGGTGCAGCCACAACAACAAGTTTCATTGCAGACAAAGGGCTCTCAGGATGCTAAGGAATTGCATATGTTTGTGTGGAGTTCAAGTGCTTCGCCGGTTTCGGAAAGTGCCGGTCTCAATGCATTCCGAAATTCGGAACAATCGGAAGAGGGTGCTAAAGAGATCAGGATGGTGGTTCCTGATGAACATAATCAAAATGGTGAAACAAATATCAAAGGTGGTCAAGAAGGTGAACTTGGTGGGGAAGAGGACTTCAAGTTTGATGGAGTTAAGGGAGGAGAACAAGTTGGAGAAGGGCCCAATGGACCTAACAAATTGGACCCAAATTCAACTGCAGAGATCCACCCTAAAGCCACTGGAGTCGCTGACTCCAGTGTCGGAAAACTTATGCCTCCGGCGAGCGTCATGACCCGACTCATTCTCATTATGGTTTGGAGGAAGCTTATCCGTAATCCAAACACTTATTCAAGTCTCATTGGTCTCATTTGGTCCCTTGTTTCCTTTAgGTGGGATGTTCATATGCCTAAAATAATAGAGAAGTCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGCTTAGgtTTGTTCATGGCCCTTCAACCCAAGATAATTGCATGTGGGAATTCAATTGCTTCATTTGCAATGGCCATTAGATTTCTTACTGGTCCAGCTGTTATGGCAGCAGCTTCTATTGCTGTTGGCCTACGTGGCACTCTCCTACATGTTGCCATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTCCATCCAGCCATTCTTAGTACAGCGTAA 1809 0.4218 MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLIALSLWTMFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGTNDLYSVQSSSRGPTPRPSNFEEQGGSSPRFGFYPAAQTVPASYPVPNPEFSSTTKTVKSQSQNLVQPQQQVSLQTKGSQDAKELHMFVWSSSASPVSESAGLNAFRNSEQSEEGAKEIRMVVPDEHNQNGETNIKGGQEGELGGEEDFKFDGVKGGEQVGEGPNGPNKLDPNSTAEIHPKATGVADSSVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01073 602 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 602 - -
Tsu01g01073 602 MobiDBLite consensus disorder prediction 403 417 - -
Tsu01g01073 602 MobiDBLite consensus disorder prediction 261 288 - -
Tsu01g01073 602 MobiDBLite consensus disorder prediction 386 441 - -
Tsu01g01073 602 TIGRFAM 2a69: auxin efflux carrier 1 602 IPR014024 -
Tsu01g01073 602 MobiDBLite consensus disorder prediction 307 332 - -
Tsu01g01073 602 Pfam Membrane transport protein 9 602 IPR004776 GO:0016021|GO:0055085
Tsu01g01073 602 MobiDBLite consensus disorder prediction 261 291 - -
Tsu01g01073 602 PANTHER AUXIN EFFLUX CARRIER COMPONENT 4 1 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01073 Tsu-Chr1 9878928 9883077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01073 1 602 Organic Solute Cotransporters AT1G70940 74.478 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01073 K13947 - gmx:100802247 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01073 01 9878928 9883077 Tsu01g01073 01 9878928 9883077 ECH