Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01044 ATGGTTAAGTCAAATGTAGTTGTTGAGAATTCAGAGTTTAACTCTATGCTCCCAGATTCAAATTTTCTGTCTATACACTTCTTGTTCATAACTTCATATTGGTTTCTGAATCATGAGTCTGTCATATTGCAGAGTGGCAAGTCTGCAGCTGTTTATGCTTGTGCCCGGGAGCAAGGGTTTGACGTTTTAGAGCTCAATGCATCAGACTCTCGAAATGGGGTTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACACGGTGTCAAAAGGTTAGTGGAACACACTGTGAGTTCACAGAAGAAAACTGTGAAACTGTTCCCAGCCCCAGCTTCACCTAATGTTAAAGCAGCTGATGAGAAGGATGATGATGTGATTGAAATGATAACGATATCTGATGATGGAGCTCATTGTCCTGGTGGAACATCTCGGAAGTTACATGACACAAATAGTGCACTTACATCTGATTCTGTCCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCCGAGACAGCAAAAGGGCCAATTATACTGACCAGCAACAGTAAAAATGCTGGCCTGCCCATTAATTTTTGTAGACTACATGTTTCTTTCTCATTACCATTGGCAGATGAGTTGCTTTGCCATTTGTTCAAGGTTTGTGCCGCAGAAAAAGTCAACATCAATCCTCTTTTATTGGAGAAGTTTATCCAGTCTTGTGACAGGGATATTCGTAAAGCCATTATGCATCTTCAGTTCtggttccaaaataaaaaacatagcAAAGACAAAAAAGTGCAGACAGTATATGGGTCACTACCTTTTGATCTTGAGGCTGGTCATACAATACTACCAAAGATAATACCTTGGAGTTTTCCCTCAGAGTTATCCAAACTAATCGAGAAGGAAGTTGCCAAGTCAATAACCATAATTGAAAACAACTCAAACTGGGAAGGATTAGCTACTGAAGAGCTTTGCATAAATGACAAGCAAAATAACTTAGATGTGCAGTGTATGGAAACTGATTATTTAGAGCCCAAAGTAGAGGTCTCAAAGAGGATTGCACCTATTACAGACTGCGGTGAGTTTGAAAGTCAATATAGTGCTATCTCTGAGCTTTGTAATTGGTCTGGATCCTCGGTAACATCCTCTTGGCAAAACGACCAAAATAACCTTGTAGCAGTGTCCTCGGATGCTATGAATAAGGATCCATATAATAGACATTTTGTAGATGTTCACGACGAAGCTTACAAGAGACAATGCCTTGAAGGTAATGGTGAATCTTCCTTTGCATTTCTATTGAATCAAAGCTATGCCAATATGTCATTTTGCGAGCTGCTGCGTTCTGGTTTGGAAAATTCAGAGGATGAACAGTGTAAATATTTAGAAACAACGTACGATGCCTgcttaaacaaaacacctaaatCACTTGATATGTCTTGTTTTCCAGAATCAAGACTTGTTTCCGAGACTGCAATTCAAAATAGAATAGAAACAAAGTCGGGAGTAGTGTCATATGGTGACCATCTTGCTTGTCCGATAGATGATTCTCTGGATAATGAGATGACACCATTCTCTTTTGGTGTTTGTCAGCGCTTGGCCAAAATGCCTCAGGATCGAGATTTGTTGGTGAATACTGAAATTCCCAAATCTTCTCCAAGAACAACAGCACAGGATTTTATTGATGAGAACATGGAAATCCCATCTGTGTACAACACATTGGATGAGTGCAGTCAAACCGATGTTAAGTTGAAGTCAAATTTTGTTGATTCTACTAGTCAATCTATGGAGATAGATTTGGTGCAAAGTTTCTGGATAAAACTTCGTGATTGTCGAACAGATTTAAAACAGCATGCCACCTCAGAACACATAGGTGCTATCGAGGTTGTTAAACTTACTAGTGGGCTAAGTAATCTAATTTCAGAAGCTGATTTGTTGTTTCGTAATCACCAGCAAAAACAATGTGGTATTATGGAACCTCCAACTTTCCTGTCTGATGAATCCACATTTAGTTGGTATGATGAACAAATGATGATGTCAACTATTGCTGTACATGGATTTTGCTTTTATGCCAAGCATATAGTAGATGTCGGATCCAAATTGGCTTTTGCAAACAGGGTCGACATAACTTCAGAGATGTTGGCTTCTACTATAAATATTATGGCTCTGGGGAAGTTATCAAGACAGGACCACACCAAACCCATGAGTAACTTTACTGAAGAGCTTTTAGAGGTGAACAACCCAAGGAATGATAAGAAGAGCATGCAATATGAAGAAAGAAGAACATCTCTGGCCAACGTGATCAGATCCATTGTTCCTGCAAGTTCATCAACAACGGCAATTAAAGACATTGCATTTAGtgaatatctttcttcactGCGCCAAATTTCAATTTCCGAGGGTTTCCGCATTTCACATGGTGTTAAAAAGATGCGGAAAGGAAGGCGGAGTGCTGAACATTATTTGAGCAGAGGTAAAATGGTGTTGTCTCCTGAAGATATATCATTGGTGAGTGAAGGTGATTTGTACAGAAAGATGTCTTCACAGTATGCTGCTAACATGGAAAGGAACTGCACAGGATTAAACATTGTAGCTCAGATTTAA 2631 0.3865 MVKSNVVVENSEFNSMLPDSNFLSIHFLFITSYWFLNHESVILQSGKSAAVYACAREQGFDVLELNASDSRNGVAVKQYFGDALGSHGVKRLVEHTVSSQKKTVKLFPAPASPNVKAADEKDDDVIEMITISDDGAHCPGGTSRKLHDTNSALTSDSVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKNAGLPINFCRLHVSFSLPLADELLCHLFKVCAAEKVNINPLLLEKFIQSCDRDIRKAIMHLQFWFQNKKHSKDKKVQTVYGSLPFDLEAGHTILPKIIPWSFPSELSKLIEKEVAKSITIIENNSNWEGLATEELCINDKQNNLDVQCMETDYLEPKVEVSKRIAPITDCGEFESQYSAISELCNWSGSSVTSSWQNDQNNLVAVSSDAMNKDPYNRHFVDVHDEAYKRQCLEGNGESSFAFLLNQSYANMSFCELLRSGLENSEDEQCKYLETTYDACLNKTPKSLDMSCFPESRLVSETAIQNRIETKSGVVSYGDHLACPIDDSLDNEMTPFSFGVCQRLAKMPQDRDLLVNTEIPKSSPRTTAQDFIDENMEIPSVYNTLDECSQTDVKLKSNFVDSTSQSMEIDLVQSFWIKLRDCRTDLKQHATSEHIGAIEVVKLTSGLSNLISEADLLFRNHQQKQCGIMEPPTFLSDESTFSWYDEQMMMSTIAVHGFCFYAKHIVDVGSKLAFANRVDITSEMLASTINIMALGKLSRQDHTKPMSNFTEELLEVNNPRNDKKSMQYEERRTSLANVIRSIVPASSSTTAIKDIAFSEYLSSLRQISISEGFRISHGVKKMRKGRRSAEHYLSRGKMVLSPEDISLVSEGDLYRKMSSQYAANMERNCTGLNIVAQI 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01044 876 Gene3D - 45 211 IPR027417 -
Tsu01g01044 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 278 IPR027417 -
Tsu01g01044 876 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 44 864 IPR004582 GO:0006281
Tsu01g01044 876 Gene3D - 217 280 - -
Tsu01g01044 876 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 44 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01044 Tsu-Chr1 9612778 9617855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01044 - - gmx:100815984 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01044 01 9612778 9617855 Tsu01g01044 01 9612778 9617855 ECH