Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01043 ATGGAAGAAGGCCTAGTTTGCCAGTGGAGCGTCTTTAGATCTCTTTTGGCAATTCTTCAATGGTGGGCTTTCAATGTCACTGTCATTATTATGAACAAGTGGATCTTTCagaAATTGGATTTCAAGTTTCCCCTATCGGTATCCTGTATCCACTTTATCTGCTCAGCCATTGGAGCATATGTGGTAATTAAAGTGCTGAAGCTTAAACCACTCATAGCTGTTGACCCTCAAGATCGCTGGAAAAGAATCTTTCCTATGTCATTTGTGTTCTGTATTAACATAGTTTTGGGGAATGTGAGCTTGCGCTACATACCGGTTTCTTTTATGCAAACAATAAAGTCATTCACTCCTGCAACAACAGTTGTTTTGCAGTGGCTAGTATggagaaaatattttgactGGCGCATTTGGGCTTCTCTCATACCCATTGTTGGAGGGATTCTTCTGACATCTATTACAGAGCTAAGCTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACTTCTACAAAGACTATCCTTGCAGAGGCTCTGTTGCATGGTTACAAATTTGACAGCATAAATACAGTTTATTACATGGCACCTTTTGCAACCTTGATCATGGTATTACCTGCTTTCTTACTTGAAGGCAATGGAATTCTTGAGTGGTTCAGTGTTCATCCATATCCTTGGGCGGCCATGATCATTATTTTCAGCTCCGGTGTTTTGGCATTCTGCCttaatttctctattttttatgtGATTCACTCCACCACAGCTGTAACATTTAATGTTGCTGGAAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAATCCGATTTCATATATGAATGCGGTTGGATGTGCCATAACTCTTGTTGGATGTACATTCTATGGTTATGTTAGGCACATGCTCTCCCAACAACCACCAGTTCCAGGAACTCCTCGGACACCTAGGACGCCTAGGATAATAgctaaagAGCTCAGTAAACTCCTCGCAGCTGTTGCAAGTGCGGCTTCCACACAGACGATTGAATATGAAATTAGAGAATGCAGATACCCAATTTCAAAACCCCTAAAAACTAGATGTACTAGAAAAAACCCTAACAGCTTCCGCCAGCAACAACAGCAAGAAAACAATGAGAAGGATTTCAGAAGGGTTAATTGTTACCTCAGAGAAGTGTGTGCTTTGAAGGAGGAAATGCTAGTTTCGCCGGAGATTGGTGACGCGCCGTCACAGATATCGTTCCTCTTTGCCGGAGATAGCACTTGTGGTTCTCTTTGGTCACTTGTTAGCTCTTGGATTGGCTCCACATTGGTGGACTCTCAGACATTATCAGATCACTTTTTGCAGTTTACTTCTTCGGCATGTGTTTCTCGAGCACGCCGCTCCTTTATGCAGCTCATTTGTTCAGCTGTTGAAACTGTCAAAATGAAGTGCAAACTAGAACATATTAAAGACTTGAAGTTCCATTTCGACGAACAAATCAACATACACAAGGCAGCTGATATACAATTCTAG 1530 0.4065 MEEGLVCQWSVFRSLLAILQWWAFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYVVIKVLKLKPLIAVDPQDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSITELSFNMFGFCAALFGCLATSTKTILAEALLHGYKFDSINTVYYMAPFATLIMVLPAFLLEGNGILEWFSVHPYPWAAMIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYMNAVGCAITLVGCTFYGYVRHMLSQQPPVPGTPRTPRTPRIIAKELSKLLAAVASAASTQTIEYEIRECRYPISKPLKTRCTRKNPNSFRQQQQQENNEKDFRRVNCYLREVCALKEEMLVSPEIGDAPSQISFLFAGDSTCGSLWSLVSSWIGSTLVDSQTLSDHFLQFTSSACVSRARRSFMQLICSAVETVKMKCKLEHIKDLKFHFDEQINIHKAADIQF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01043 509 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 327 - -
Tsu01g01043 509 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 300 - -
Tsu01g01043 509 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 152 - -
Tsu01g01043 509 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Tsu01g01043 509 PANTHER SOLUTE CARRIER FAMILY 35 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01043 Tsu-Chr1 9602344 9612761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01043 1 325 Organic Solute Cotransporters AT1G77610 89.538 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01043 K15285 - gmx:100817042 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01043 01 9602344 9612761 Tsu01g01043 01 9602344 9612761 ECH