Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01040 ATGAAATTCTTCATGTCTCAAATTGAGTTTCTTAGGCACATGAGACTTGTGTCTTTGATTGTGATTATTTTATGTAGTAGTACTTCTCCAATATTTGCTACAAAGGGTTGTGATTTTCCTGCCATTTTCAACTTTGGTGCTTCAAATTCTGATACTGGTGGATTGGCTGCTGCCTTCCAAGCACTGCCGTCACCATATGGAGAGACTTATTTTCATAGATCAACTGGAAGATATTCTGATGGAAGAATCATTCTTGATTTCATAGCACAAAATTTTGGACTTCCCTATCTCAGTCCATATCTCAATTCTCTTGGGTCCAACTTCACACATGGTGCAAATTTTGCAACAGCAGGATCAACAATTAGAATTCCAAATAGTATTTTACCTCGAGGAATGTTTAGTCCATTCTCCCTTATAATTCAGTACAGGCAATTCAGAGATTTCATACACAACATAAAATTCATTAGAGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTTTTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTGTTGCTGGGTTGAGTGATAATAAGACCATACAACAAGTCAATGCTACTGTACCCGATATAGTAAACACTTTCATAGAGAATATCAAGAACATATACAACTTAGGTGCTAGATCATTTTGGATACACAACACAGGACCAAATGGATGTCTTCCTATAACTTTGGCAAATTTTCCTTCCCCTATAAAGGATAGATATGGTTGTGCAAAGCAATACAACGAAGTATCTCAGTATTTCAATTTTAAGTTGAAGGAAGCATTAGCTAAACTTCGAAAAGATCTTCCTCTTGCTGCAATCACATACGTAGATATTTACTCTCctaaatatttactttttcaaaatccaaaaaaatatgGATTTGAGCATCCACTTGTGGCATGTTGCGGCTATGGAGGGAAGTACAACAATAACATTAGAAATAAATGTGGAGAATCTATAAACATAAACGGTACAAAACATGTTGTGGGTTCATGTAAAAATCCATCTAAGAGAGTAGTATGGGATGGAACTCATTACACAGAGGCAGCTAACAAATTTGTATATGATAAAATTTCTACTGGAGCATTTACAGATCCTCCCATTCCCCTAAATATGGCGTGTCACCGAAAATTTCCTTGA 1173 0.3512 MKFFMSQIEFLRHMRLVSLIVIILCSSTSPIFATKGCDFPAIFNFGASNSDTGGLAAAFQALPSPYGETYFHRSTGRYSDGRIILDFIAQNFGLPYLSPYLNSLGSNFTHGANFATAGSTIRIPNSILPRGMFSPFSLIIQYRQFRDFIHNIKFIRDQGGVFATLIPKEDYFSKALYTFDIGQNDLVAGLSDNKTIQQVNATVPDIVNTFIENIKNIYNLGARSFWIHNTGPNGCLPITLANFPSPIKDRYGCAKQYNEVSQYFNFKLKEALAKLRKDLPLAAITYVDIYSPKYLLFQNPKKYGFEHPLVACCGYGGKYNNNIRNKCGESININGTKHVVGSCKNPSKRVVWDGTHYTEAANKFVYDKISTGAFTDPPIPLNMACHRKFP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01040 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 388 - -
Tsu01g01040 390 CDD SGNH_plant_lipase_like 40 372 IPR035669 -
Tsu01g01040 390 Gene3D SGNH hydrolase 32 372 IPR036514 -
Tsu01g01040 390 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 388 - -
Tsu01g01040 390 Pfam GDSL-like Lipase/Acylhydrolase 42 369 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01040 Tsu-Chr1 9572035 9577304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01040 40 383 Acyl Lipid Metabolism Gene Families AT4G10950 28.771 1.45e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01040 - - cam:101514585 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01040 01 9572035 9577304 Tsu01g01040 01 9572035 9577304 ECH