Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01038 ATGAAATTCTTCATGTCTCAAATTGAGTTTCTTGTGTCTTTGATTGTGCTTATTTTATGTAGTAATACTTCCCCAATATTTGCTACAAATGGTTGTGATTTTCCTGCCATTTTTAGCTTTGGTGCTTCAAACACTGATACTGGTGGAGCGGCTGCTGCCTTCCAAGCACTACCGTCGCCATTTGGAGAGACTTATTTTAAGAGATCAACAGGGAGATACTCGGATGGCAGAATCATTCTTGATTTcataaCACAAAATTTTGGACTTCCCTATCTCAATCCATATCTTAAGTCTATTGGATCCAACTTCACACATGGAGCAAACTTTGCAACAGCAGGATCAACAATTAGAATTCCAACTAGTGTTTACCCTCGAGGAACATCTAGTCCATTCTCCTTTCTAATTCAGTACAGACAATTTAGAGATTTCATACCCAACACAAAATTCATCAGAGATCAAGGAGGTGTATTTGCAGCATTGGTCCCCAAAGAAGATTATTTCTCCAAAGCCTTGTATACATTTGATATTGGTcaaaatgattttattgatGGGTTACTTAATAATGCGACTATACCACAACTCAATGCTACTGTACCTGATATAGTAGACAGTTTCATAGAGAATATTAAGAATATATACAACTTAGGTGCTAGATCATTTTGGATACACAACACAGGACCAAGTGGATGTCTTCCCATAACTTTGACAACTTTTCCATCTGCTATAAAAGATAGATATGGTTGTGCAAAGCAATACAATGAAGTAtctcaatatttcaatttaaagttAAAGGAAGCATTAGCTCAACTTCGAAAAGATCTTCCTCTTGCTGCAATCACATATGTAGATATTTACACTCCTAAGTTCTTACTTTTTCAAAATCCAGAAAAATATGGATTTGAGCTTCCATTTGTGGCATGTTGCGGCTATGGAGGGAAGTACAACAATAACGGTAGAAATACATGCGGAGAATCCTTAAATGTAAATGGTACAAATCATGTTGTGGGTTCATGTAAAAATGCTTCTAAGAGAGTGATATGGGATGGGACTCATTACACAGAGGCAGCTAACAAATTCGTCTTTGATAGAATCTCTACCGGAGCATTCACAGATCCTCCTGTTCCCCTAAATATGGCATGTCACCGAACATTCACTTGA 1158 0.3627 MKFFMSQIEFLVSLIVLILCSNTSPIFATNGCDFPAIFSFGASNTDTGGAAAAFQALPSPFGETYFKRSTGRYSDGRIILDFITQNFGLPYLNPYLKSIGSNFTHGANFATAGSTIRIPTSVYPRGTSSPFSFLIQYRQFRDFIPNTKFIRDQGGVFAALVPKEDYFSKALYTFDIGQNDFIDGLLNNATIPQLNATVPDIVDSFIENIKNIYNLGARSFWIHNTGPSGCLPITLTTFPSAIKDRYGCAKQYNEVSQYFNLKLKEALAQLRKDLPLAAITYVDIYTPKFLLFQNPEKYGFELPFVACCGYGGKYNNNGRNTCGESLNVNGTNHVVGSCKNASKRVIWDGTHYTEAANKFVFDRISTGAFTDPPVPLNMACHRTFT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01038 385 Gene3D SGNH hydrolase 27 367 IPR036514 -
Tsu01g01038 385 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 384 - -
Tsu01g01038 385 CDD SGNH_plant_lipase_like 35 367 IPR035669 -
Tsu01g01038 385 Pfam GDSL-like Lipase/Acylhydrolase 37 364 IPR001087 GO:0016788
Tsu01g01038 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 11 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01038 Tsu-Chr1 9552313 9556831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01038 35 378 Acyl Lipid Metabolism Gene Families AT4G10950 26.891 8.75e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01038 - - cam:101514585 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01038 01 9552313 9556831 Tsu01g01038 01 9552313 9556831 ECH