Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01036 ATGTCTTGTATCTTAATGGAGTTTGTTCATATTTCAAGTGTgtcatttttattggttttattaTCTATAGCTACTACTACCATAGTGATTGGAAGTAGTAGTAATAGTGAGTGCAATTTCCCTGCAATCTTTAACTTTGGTGACTCAAACTCAGACACTGGTGGCTTGGCTGCTTCACTTCTACCACCAACACCACCATATGGAGAGACTTATTTCCATAGACCTGAAGGGAGGTTCTCTAATGGCCGTCTAGTCATTGATTTCATTGCTCAGAGTTTTGGACTACCATATCTAAATGCATATCTTGATTCTTTGGGGACCAATTTTTCACATGGTGCAAACTTTGCTACATCAGCCTCAACAATTAGGCCTCCACCTAGTATTATACCTCAAGGTGGATTTAGTCCTTTCTACCTTGATGTTCAATACACTCAATTCAAAAATTTCAAACCAAGAACACAATTCATTATACAACAAGGTATAAGAAATACTTTCATAAATTcaatatttacatatatttttatggtTCTAAATATTAAGGGCATAGTTTTCTTTGTAGGAGGTATATTTGCTAGCTTGATGCCCAAAGAAGAGTATTTCTCTAAGGCTTTGTACACATTTGATATTGGTCAAAATGATCTTGGTGCTGGCTTTTTTGGAAACAAGACTATACAACAAGTAAATGTTTCTGTGCCAGAAATAATCAATAGTTTCTCCAAAAATATTAAGgaCATATACAATTTAGGAGCTAGATCATTTTGGATACACAACACGGGACCCATTGGCTGCCTCCCTTATATTTTGGTGGGTTTTCCGTTAGCTGAAAAGGATGAAAATGGTTGTGCAAAGCAATATAATGAAGTAGCTCAATATTTTAACCAAAAATTGAAGGAAGAAGTGGTTCAACTTCGTGATGATCTTCCTCAGGCAGCAATTACATATGTAGATATCTACTCCGTTAAATACTCTCTTTTTAGCAATGCAGAGAAATACGGATTTGAGCATCCACTAGTTGCTTGTTGTGGCTATGGAGGACAATATAATTATAGCAGTAGTGTTGGATGTGGAGGAACCATAGAGGTCAATGGTACTCAAATTTTTGTAGGTTCATGTGAAAGACCATCTACAAGAGTGAATTGGGATGGTGTTCACTATACAGAAGCAGCTAACAAGTTCATTTTCCATCAAATTTCTACTGGAGCTTTTTCTGATCCACACATTCCATTGAATATGGCATGTCACAGAAATTCCATAAAAATGTTGTAG 1266 0.3523 MSCILMEFVHISSVSFLLVLLSIATTTIVIGSSSNSECNFPAIFNFGDSNSDTGGLAASLLPPTPPYGETYFHRPEGRFSNGRLVIDFIAQSFGLPYLNAYLDSLGTNFSHGANFATSASTIRPPPSIIPQGGFSPFYLDVQYTQFKNFKPRTQFIIQQGIRNTFINSIFTYIFMVLNIKGIVFFVGGIFASLMPKEEYFSKALYTFDIGQNDLGAGFFGNKTIQQVNVSVPEIINSFSKNIKDIYNLGARSFWIHNTGPIGCLPYILVGFPLAEKDENGCAKQYNEVAQYFNQKLKEEVVQLRDDLPQAAITYVDIYSVKYSLFSNAEKYGFEHPLVACCGYGGQYNYSSSVGCGGTIEVNGTQIFVGSCERPSTRVNWDGVHYTEAANKFIFHQISTGAFSDPHIPLNMACHRNSIKML 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01036 421 CDD SGNH_plant_lipase_like 41 400 IPR035669 -
Tsu01g01036 421 Gene3D SGNH hydrolase 30 400 IPR036514 -
Tsu01g01036 421 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 160 - -
Tsu01g01036 421 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 156 416 - -
Tsu01g01036 421 Pfam GDSL-like Lipase/Acylhydrolase 43 397 IPR001087 GO:0016788
Tsu01g01036 421 PANTHER ESTERASE-LIKE ISOFORM X1 12 160 - -
Tsu01g01036 421 PANTHER ESTERASE-LIKE ISOFORM X1 156 416 - -
Tsu01g01036 421 Coils Coil 293 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01036 Tsu-Chr1 9517643 9519818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01036 41 411 Acyl Lipid Metabolism Gene Families AT4G10950 27.937 2.81e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01036 - - cam:101514585 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01036 01 9517643 9519818 Tsu01g01036 01 9517643 9519818 ECH