Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01034 ATGCTCTTCTGTGTTGATGTTAATGTTGGTTTGGTAGACAAAATGACGGATAAGAAGAGATGGTTATGGAAGCGAAAGTCTTCCGAGAAGAGTTCGGGTGAAGCTGAGAGTTCGGGATCTGTTTCCTCTCATTCTGAGAGGTATTCTGATGAACAGGAAGTATCAAAAGAATTTTCTAATGGAAGCAGTCATTCACCTGATGTCACCTCAAAAGCTGTAGCCTGTGCCGAAGATGTAGACGATAGTTCAGTTATGAACGAACAGCTGCATGATGAAGTTGCACTGACACCTCTTTCTACATGCATAGAAAATGGCGGTTCATTAGAAGTATATAGAAATGGAGACGATAGTTCAGTTATCAATGAACAGCAGCCTGATAGAGTTACATCGACACCTCTTTCTACATGCATCGAAAATGGCGGTTCATTAGAGGTAGATAATAAGGGAGACGATAGTTCAGTTATCAATGAACAGCTGCCTGATAGAGTTGCATTGACACCTCTTTCTACATGCATTGTAAATGGCGGTTCATTAGAAGTAgataaaaatggaagaaatgaaaatatattaaatggAAAAGAAGGTGATCTAAATGGCGGGTCGAGGGATATATCTGAGAAGCTATCTGCTGCTCCTGTTAATGTCAATGCCAAAGAAGACTTAGTTAAGCAGCATGCAAAAGTTGCTGAAGAAGCCATAGCAGGTTGGGAAAAAGCTGAAAATGAAGTAGCAAATTTAAAGAAGCAACTCGGCACAGTAACCCTCAGGAATTCAGCTCTTGAAGATAGAGTCACACATCTAGATGGAGCACTTAAGGAGTGTGTTAGGCAGTTAAGACAAACAAGAGAAGAGCACGAAGCAAATATTCAAGACGCCGTAGCCGAAAAGACTCACGAATTGGAATCTGACAAAGTTAAACTTGAGAGCAAGCTCATTGAGCTCCAGAACAAATTAGATGCTTCAAATGCCAAATCTTCTATTGAGCGTGATATGCGTCAAAAAGTTGAACGGTtggagaaagagaaaatgtcTCTCCAGCATGAGATCCTAGTTCAATCAGAAGAGCTGAAAATCAGAACTATTGAGAGGGATTTAAGCACTCAAGCTGCTGAGACAGCTAGTAAGCAACATTTAGAAAGCATCAAGAAAGTCGCCAAGCTTGAGGCCGAGTGTCGGAGACTAAAGAGCATTGTTTCTAAAGCATCGTTAGTTAATGATCATAAATCGATTGCTTCAtcctcattttgtgttgaatcTCTCACAGATAGTCAATCAGACAGTACGGAGCGGCTTACTGCGGTGGATTGTGATGTCCATAAAATAAGTGGTTCAGAGCTAAACAGGTGTGAACCAAGTTGTTCCGACTCATGGGCATCCGCACTGATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCTGCCGACAAGATCCATCCGGTTCTGTTAAAATAGATCTAATGGATGACTTTCTTGAAATGGAACGACTCGCTGCATTGCCTGAGACTAAGACTGAAAGCTTTGTTGAGGAGTCGGTTGTTGCCAATCAATGCATTGACAAAGGAAGCACTCTCAGAGCCGAGTTTGACGTAATGAGTCAGCAAATGGATGAACTAAAAATGAAGTTAGAGAAGGTGGAAGCAGATAAAGCTGAACTTGGGATAGCTTTGATGAAAAGTGAAGAGTGTATCGAGGAGTCACGACTTCAGTTGAGTGAGGCAATACAGAAACTGGAGGAGCTTCAAACAGAGCTAGAAATTGCGTACAGATCAAATCAAAAGTTAGAAAATTGCCTCATGAGCATGGAGACAGATACTCAAAGGCTGTCTTCCAAGGTCGTTTCGTTAGAAGCAGAGGTTGATAAGGAAAGGGCCATGTCGCACAAATTTACAATGAAGTGTAAGAACCTTGAAGAAGAGTTAGAAAGCAAATCTACGATGCTTGGCTTATTAGAAACTGAGGCTGATAAGGAGAGGAGCGCATTGcatgaaattgcaataaaatgTGACGGCCTTGAGGAAGAGCTAGAAGGAAAATGTGCAAAGGTTGACTTGTTAGAAGCAGAGCTTGTTAAGGAGAGGATTTCGTCACATGAAATTATAGCCAAGTTAAAGGACCTTGAGGAAGAGCTAGAAGGCAAATCTGCTAAGGTCAACTTGTTAGAAGCAGAGGTTGTTAAAGAAAGGGCCGTGTCAGATGAAATTGCAACCAAGTGTAAGGACCTTGAGAAAGAGCTAGAAAGCGAATCTGCAAAGGTTGTCATATTAGAAGCTGAGGTTGAAAAGGAGAGGGCTATGTATGAAGAAATTGCATTGAAGTGTCGGGAATTGGAGGAAGAAATACTCAGGCCAGCGGCTAGTTTGTATggagaaaagaaaatcaagcaGGAGGACCTAGCACTTGCTGCCGGAAAGCTTGCCGAGTGCCAGAAAACAATAGCATCTTTAGGGAATCAGCTAAAATCTCTAGCTACACTTGAGGATTTCCTTATTGACACTGCTGGAATTCCCCCAAGTCCATCACTCGTTGCTCATGCTGGTGGAGAGTTGTGGAAGATGCATTCAAATGTAACTTTTTCACCTAAAAGAGATTCTACTTCTTCTAGGTTGGCTGATGGTAGCTCTGGTCCATCCATAAACCAAAACGAGGAAAGCTCACCACTTTCATCGTCTTCTTCGACTTCATCATCAGCTTTGCCAAATCATGCCAGTTCTGAGAAGAGTCGAAATGGTTTCGCAAAATTTTTCTCGCGAACCAAGAGTGGTATTCGATTAGAAATTTAG 2781 0.4049 MLFCVDVNVGLVDKMTDKKRWLWKRKSSEKSSGEAESSGSVSSHSERYSDEQEVSKEFSNGSSHSPDVTSKAVACAEDVDDSSVMNEQLHDEVALTPLSTCIENGGSLEVYRNGDDSSVINEQQPDRVTSTPLSTCIENGGSLEVDNKGDDSSVINEQLPDRVALTPLSTCIVNGGSLEVDKNGRNENILNGKEGDLNGGSRDISEKLSAAPVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVANLKKQLGTVTLRNSALEDRVTHLDGALKECVRQLRQTREEHEANIQDAVAEKTHELESDKVKLESKLIELQNKLDASNAKSSIERDMRQKVERLEKEKMSLQHEILVQSEELKIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKSIVSKASLVNDHKSIASSSFCVESLTDSQSDSTERLTAVDCDVHKISGSELNRCEPSCSDSWASALIAELDQFKNEKCCRQDPSGSVKIDLMDDFLEMERLAALPETKTESFVEESVVANQCIDKGSTLRAEFDVMSQQMDELKMKLEKVEADKAELGIALMKSEECIEESRLQLSEAIQKLEELQTELEIAYRSNQKLENCLMSMETDTQRLSSKVVSLEAEVDKERAMSHKFTMKCKNLEEELESKSTMLGLLETEADKERSALHEIAIKCDGLEEELEGKCAKVDLLEAELVKERISSHEIIAKLKDLEEELEGKSAKVNLLEAEVVKERAVSDEIATKCKDLEKELESESAKVVILEAEVEKERAMYEEIALKCRELEEEILRPAASLYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTAGIPPSPSLVAHAGGELWKMHSNVTFSPKRDSTSSRLADGSSGPSINQNEESSPLSSSSSTSSSALPNHASSEKSRNGFAKFFSRTKSGIRLEI 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01034 926 Coils Coil 696 723 - -
Tsu01g01034 926 Pfam Filament-like plant protein, long coiled-coil 450 506 IPR008587 -
Tsu01g01034 926 Pfam Filament-like plant protein, long coiled-coil 719 824 IPR008587 -
Tsu01g01034 926 Pfam Filament-like plant protein, long coiled-coil 322 400 IPR008587 -
Tsu01g01034 926 Pfam Filament-like plant protein, long coiled-coil 218 324 IPR008587 -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 704 747 - -
Tsu01g01034 926 Coils Coil 528 555 - -
Tsu01g01034 926 Coils Coil 275 295 - -
Tsu01g01034 926 Coils Coil 633 653 - -
Tsu01g01034 926 MobiDBLite consensus disorder prediction 23 71 - -
Tsu01g01034 926 Coils Coil 297 324 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 655 711 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 17 591 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 748 925 - -
Tsu01g01034 926 Coils Coil 560 597 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 704 747 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 590 644 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 748 925 - -
Tsu01g01034 926 Coils Coil 668 688 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 17 591 - -
Tsu01g01034 926 Coils Coil 328 355 - -
Tsu01g01034 926 MobiDBLite consensus disorder prediction 55 69 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 590 644 - -
Tsu01g01034 926 Coils Coil 731 779 - -
Tsu01g01034 926 Coils Coil 229 249 - -
Tsu01g01034 926 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 655 711 - -
Tsu01g01034 926 MobiDBLite consensus disorder prediction 857 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01034 Tsu-Chr1 9496738 9501735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01034 - - mtr:MTR_1g030010 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01034 01 9496738 9501735 Tsu01g01034 01 9496738 9501735 ECH