Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01020 ATGAAAGTGACATGGAAGAACACCAAGAAGAAGAAACCTTCTCTACCTCCGTTATCACACTTCAATGACCTTCCCTTTGAGCACGATAACGACCCTAACAAAGACACTCCTGAAGATGCTGATTCTGATGGAAGAACATTGCGTTCTCCCACTTCTGATCAATCAACTCAATTAGCTATGCAATTTCAAGCTCAAGGAGACAACCTTGCTATGGAGGGGAAGTATAGGGAAGCACTTGGTAAATGGGAAACTGCCATTACATTGGCTCCTGATATTCCAGTTTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGAAGCCTGGAATGCTTTAAAGGCTGCAATTCGAGCTACGGAATTGAAACCATCATGGGCTGAGGCTTGGGTCACACTTGGCAGAGCACAGCTGAATTATGGCGAGCCAGATAATGCTATTGAAAGCTTTGACAGAGCTTTAGCTCTCAAGCCTGATTATGAAGAAGCACACGATGATAGAAAAACTGCGTTACgtcttgtaaaaaaaagaaagcaacTTCACTCATCAGGTTTGAGTGATATTCAAAATCGTTATACTGTAGGTGATAAGAATGAAAGCTAG 603 0.4063 MKVTWKNTKKKKPSLPPLSHFNDLPFEHDNDPNKDTPEDADSDGRTLRSPTSDQSTQLAMQFQAQGDNLAMEGKYREALGKWETAITLAPDIPVLHEQKAQVLLEIGEAWNALKAAIRATELKPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAHDDRKTALRLVKKRKQLHSSGLSDIQNRYTVGDKNES 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01020 200 MobiDBLite consensus disorder prediction 1 56 - -
Tsu01g01020 200 SMART tpr_5 93 126 IPR019734 GO:0005515
Tsu01g01020 200 SMART tpr_5 127 160 IPR019734 GO:0005515
Tsu01g01020 200 SMART tpr_5 59 92 IPR019734 GO:0005515
Tsu01g01020 200 Gene3D Tetratricopeptide repeat domain 49 191 IPR011990 GO:0005515
Tsu01g01020 200 ProSiteProfiles TPR repeat region circular profile. 127 159 - -
Tsu01g01020 200 MobiDBLite consensus disorder prediction 24 46 - -
Tsu01g01020 200 SUPERFAMILY TPR-like 56 178 IPR011990 GO:0005515
Tsu01g01020 200 ProSiteProfiles TPR repeat profile. 127 160 IPR019734 GO:0005515
Tsu01g01020 200 PANTHER OSMOSIS RESPONSIVE FACTOR 1 199 - -
Tsu01g01020 200 Pfam Tetratricopeptide repeat 127 160 IPR001440 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01020 66 171 EF-hand Containing Proteins AT2G32450 33.019 1.43e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01020 - - pvu:PHAVU_001G066600g 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01020 01 9336608 9340273 Tsu01g01020 01 9336608 9340273 ECH