Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01016 ATGACCGACAGCAACTCCAATCCCGACACCACCGCCGCCGCTAGCGATTCGTCGCGACCTTCATCGACGTGCATCCGAATAGGTGATCGACAACTTTTCAAAGTCGAGCTCCGACCAGATGAAACCACAATCGTATCGTGGAAGAAGCTTCTCAAAGACGCCAATAAGGATAACATTGGATCCACTTCTGCTGCTCCTCAGCAAGTTCCGAAGATGAACCCTGCGCTCGAAGCTAGAATCGCTCCCGGTCAAACtgagaacaaagaagaagatgcTCCCCAGACAAATCGGTTCAGTGCTGTGATAGAGAAAATTGAACGCCTTTACAtgGGTAATGATAGTAGTGATGAGGAGGATCTACCTGTTGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGACGATGCTGAACTGGATGAATATTTTGAGGTCGATAATTCCGCGATCAAACATGATGGTTTCTTTGTTAATAGGGGGAAATTGGAACGCATTGATCCTCCTCAGGTATTACCTAGTCAGCCAGCAAAGAAAAGGTGCCGGAAAGATACATTGAAGAATCCAGGTGAGAACGTTGATGGACATGTATCAAATAAACATGCAAAAGTGGGCAAGACAGCTGCTGGAAAGACTGCATCATTATCTGTGAAGAATACATTTAATTCCTCACAGAATTTGGCTGTACCTGGAGGTTATGAAGATTTGAAACCTCAGAATCAATTGGAGATCTCTGGAATTACTTTGAAAAAGAAAGCGACTGATAGTCGACCAATTTCAAATCCGTCTGCCtgtatgaaagaatcaaataacAATGTCCCTTCTGTGGTTATCTGTTTGAATGTGCCTTCTGCGGCAGAAACCAAAGCTGCTGACAAACAGACGACAGGAGTACTTCAATCCAAGAATAGAGTGGATAAATATAACGATGCAAGTGGAGTGCACGATACTTCTCATCTGAAGTACCAAGAAAAAGGTGTTTCTTCCAAATCCCAACCTGGAAGAACCCCAAGTAGTGTTGATGGTTTAGAAAACACTGGTGGatcaaaagataaaaatggCATCAATGAAGTACCAGATCTTAACTTGTCTGAGGGAAAATCTGTGATGCAAGGACCAAAATCTAAAAACATACTCAAAAAAGATAGCTCCAGTGTGAGATCAAAATCTACAATTCTTGAGAAAGCTATTCAAGATTTGGAGAAAGCGGTTGCAGAATCAAGGCCACCAACTATggaaaaccaggaggttgatagCACATCCCAAGCTATCAAACGGAGATTACCCAGAGAAATAAAGCTAAAACTTGCTAAAGTTGCGAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCACAGGAGTTAATTAATCGCCTTATGAGTATTCTTGGGCACCTGATTCAGCTCAGAACACTAAAGGTGTTTCAGCATATATGA 1434 0.4045 MTDSNSNPDTTAAASDSSRPSSTCIRIGDRQLFKVELRPDETTIVSWKKLLKDANKDNIGSTSAAPQQVPKMNPALEARIAPGQTENKEEDAPQTNRFSAVIEKIERLYMGNDSSDEEDLPVVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERIDPPQVLPSQPAKKRCRKDTLKNPGENVDGHVSNKHAKVGKTAAGKTASLSVKNTFNSSQNLAVPGGYEDLKPQNQLEISGITLKKKATDSRPISNPSACMKESNNNVPSVVICLNVPSAAETKAADKQTTGVLQSKNRVDKYNDASGVHDTSHLKYQEKGVSSKSQPGRTPSSVDGLENTGGSKDKNGINEVPDLNLSEGKSVMQGPKSKNILKKDSSSVRSKSTILEKAIQDLEKAVAESRPPTMENQEVDSTSQAIKRRLPREIKLKLAKVARLAQASQGKVSQELINRLMSILGHLIQLRTLKVFQHI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01016 477 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 19 473 - -
Tsu01g01016 477 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 19 473 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 177 201 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 324 352 - -
Tsu01g01016 477 Pfam HPC2 and ubinuclein domain 125 164 IPR014840 -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 308 323 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 1 23 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 289 307 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 289 382 - -
Tsu01g01016 477 MobiDBLite consensus disorder prediction 172 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01016 Tsu-Chr1 9268138 9277535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01016 - - mtr:MTR_1g029680 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01016 01 9268138 9277535 Tsu01g01016 01 9268138 9277535 ECH
Tsu01g01016 01 9268138 9277535 Tsu08g02862 08 43769184 43777100 PCT