Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00996 ATGGATATTGCTCATTTTGTATTCGGATTATTTGGAAATGCTTTTGGACTTTTTCTCTTCTTGGCTCCAATAATCACTTTTAAGAGGATTATTGTGAACAAATCAACAGAGAAATTCTCAGGTGTTCCTTACACTATGACACTTCTCAACTGTCTTCTTTCTGCTTGGTATGGATTACCATTTGTGTCACCAGACAACATGCTTGTAACAATCATCAATGGAACAGGAGCAGTAATTGAAATCATATATGTTTTCACTTTCATCTTGTTTGCACCTAAAAAGGAGAAGTTGAAAATAAGTAGCTTATTTGCCATTGTGATAACAATTTTCTCAGCTGTTGTTTTCATCTCTCTGTTTGCTCTTCATGGTAATTCAAGGAAAGTGTTTTGTGGTTTTGCTGCTGCAATATTTTCCATCATTATGTATGGTTCACCACTCTCAATTATGAGATTAGTGATCAGAACCAAAAGTGTGGAATTCATGCCATTCTTCCTTTCACTATTTGTGTTTCTTTGTGGTACATCATGGTTTGTCTTTGGTCTATTAGGCCGTGACCCATTTATTGCAGTACCAAATGGTGTAGGGTCAGCATTAGGGACATTGCAACTAATATTGTATTTCATATATCGTAAAAATAAAGggaatgaaaaaacaaaaacaacaacacaagAAGAATCAATGGAAATGGGCACCGCAAAACCACCCCAAACATCATCCAAAAATGAAGAACTCAAAGGGGACACGTCTTAG 750 0.3467 MDIAHFVFGLFGNAFGLFLFLAPIITFKRIIVNKSTEKFSGVPYTMTLLNCLLSAWYGLPFVSPDNMLVTIINGTGAVIEIIYVFTFILFAPKKEKLKISSLFAIVITIFSAVVFISLFALHGNSRKVFCGFAAAIFSIIMYGSPLSIMRLVIRTKSVEFMPFFLSLFVFLCGTSWFVFGLLGRDPFIAVPNGVGSALGTLQLILYFIYRKNKGNEKTKTTTQEESMEMGTAKPPQTSSKNEELKGDTS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00996 249 Gene3D - 128 223 - -
Tsu01g00996 249 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 236 IPR018180 GO:0051119
Tsu01g00996 249 MobiDBLite consensus disorder prediction 224 243 - -
Tsu01g00996 249 PANTHER RAG1-ACTIVATING PROTEIN 1 4 236 - -
Tsu01g00996 249 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Tsu01g00996 249 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016021
Tsu01g00996 249 Gene3D - 6 96 - -
Tsu01g00996 249 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00996 Tsu-Chr1 9118374 9120918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00996 1 190 Miscellaneous Gene Families AT1G21460 74.737 1.87e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00996 K15382 - gmx:100800304 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00996 01 9118374 9120918 Tsu01g00996 01 9118374 9120918 ECH