Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00992 atgcaTATTCACACTTGTTACTCAATTAAGACACTTCCATTAACATGGAACATTCCAAAAAATCATCGAACACATCGCCACCTATTACCACCACCAAGATCCACAGCAATAGCCACACCACCACCGTCGCTAAAACTATCCAAAACACACACAATGCCACCAGAAAAACTTGAAATTTTCAAATCACTAGAAAACTGGGCATCTGAATCTGTTTTACCATTGCTAAAGCCTGTGGAACAATGTTGGCAGCCACAGAATTTTCTCCCTGATCCTTCGTTGAAATTCGATGAATTCACTGATCAGGTGAAGGTCCTTCGTGAACGCACAAAGGACCTGCCTGATGAGTATTTTGTTGTGTTGGTTGGTGATATGGTGACGGAAGATGCACTTCCGACATATCAGAGTATGATTAATGGTCTTGATGGTGTTGGTGATGAGATTGGTTCGAGTCCAAGTCCGTGGGCTGTTTGGACACGGGCTTGGACCGCTGAAGAAAATAGACATGGAGATTTGCTTAGAACTTATTTGTATCTTTCTGGTCGGGTTGATATGGAGAAGATTGAGAAAACTGTTCAGTACCTCATTGGAGCTGGCATGGACCCAGGGACAGAAAACAACCCATACTTAGGATTTGTATACACGTCATTCCAAGAGCGAGCGACATTTGTATCACATGGTAACACGGCTCGCATAGCGAAAGAACGTGGCGATCCCGTGCTTGCACGCATATGTGGTACCATTGCGGCAGATGAGAAGCGTCATGAGAATGCATACTCAAGAATCGTGGAGAAGCTTCTAGAAGTGGACCCTAATGGAGCAATGCTAGCCATTGGTGATATGATGGAGAAAAAAATCACAATGCCGGCACACCTTATGTACGATGGACAAGACCCCAAGCTATTCGAGCACTTTGCAGCTGTGGCACAGCGTACCGGAGTGTACACTGCCAATGATTATGCTGATATCTTGGAGTTTTTAATCGAACGGTGGAGATTGGAGAAACTGGAAGGATTAACGGGCGAGGGAAAAAAGGCGCAGGATTTTGTGTGTGGGTTAGCGCCGAGGATTAGGAGGCTACAAGAGCGTGCTGATGCTCGTGCCCGTAAGATGAAACCACACGGGGTTAAGTTTAGTTGGATTTTCAATAATGAGGTTattttgtaa 1164 0.4459 MHIHTCYSIKTLPLTWNIPKNHRTHRHLLPPPRSTAIATPPPSLKLSKTHTMPPEKLEIFKSLENWASESVLPLLKPVEQCWQPQNFLPDPSLKFDEFTDQVKVLRERTKDLPDEYFVVLVGDMVTEDALPTYQSMINGLDGVGDEIGSSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMEKIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARIAKERGDPVLARICGTIAADEKRHENAYSRIVEKLLEVDPNGAMLAIGDMMEKKITMPAHLMYDGQDPKLFEHFAAVAQRTGVYTANDYADILEFLIERWRLEKLEGLTGEGKKAQDFVCGLAPRIRRLQERADARARKMKPHGVKFSWIFNNEVIL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00992 387 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 37 386 IPR005067 GO:0006631|GO:0045300
Tsu01g00992 387 PIRSF Dlt9_acylACP_des 18 387 IPR005067 GO:0006631|GO:0045300
Tsu01g00992 387 SUPERFAMILY Ferritin-like 44 386 IPR009078 -
Tsu01g00992 387 CDD Acyl_ACP_Desat 55 363 IPR005067 GO:0006631|GO:0045300
Tsu01g00992 387 MobiDBLite consensus disorder prediction 27 49 - -
Tsu01g00992 387 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 37 386 - -
Tsu01g00992 387 Gene3D Ribonucleotide Reductase, subunit A 39 387 IPR012348 GO:0016491
Tsu01g00992 387 Pfam Fatty acid desaturase 55 381 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00992 Tsu-Chr1 9080539 9082796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00992 31 385 Acyl Lipid Metabolism Gene Families AT1G43800 77.933 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00992 K03921 - gmx:100037478 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00992 01 9080539 9082796 Tsu01g00992 01 9080539 9082796 ECH