Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00989 ATGAGGGGTCCTACCCCGAACACCGTTGAGCCACGTCACCGATTATCAACTTCATTCAGTGAAGATACTACCAAGAGAAGGTCTCAGAAAAATAAGGATTTTAAAGATATTGAGAAAGCATCACATATTCCGTTCCTAGAAAGGAGTATAAATTGCAGGCCGAATTGGAAATTTGTTTTGGTTATTATTGTCTTGGGAACCTTGCTTACAATTTTCCATCCTCCGGCTGTTTACAATACTGATCATATATCACGGACAACATTTGTAAACAACTTGAATGGAGAGCTCGATGGAACTGATCCCCGTTATGCATCATTTCTAAATATTGACTGGAACCAAATAACTAATGTTCTTGAAAATTTGAAGGATAAGGACACATATCAGGGTGTTGGCTTATTAAACTTCAATGGCAGTGAGATTGACAACTGGAAGCAGCTAGTACCAGAAGCAGAGCATGTAGTCCTTCACCTGAACTATGCTTCTAGCAACTTTACTTGGGAGGACTTGTATCCAGAATGGAtcgatgaagaagaagaatacgAGTTTCCTATGTGTCCAACACTACCTAGGATTCAGGCACCAGGAAAACCACGGCTTGATCTTATTGCTGTTAAGCTTCCTTGCGATAAGTCAGGGCGGTGGTCAAGAGATGTAGCTCGTTTGCACCTGCAGATTGAAGCAGCAAGACTTGCTGCCACTTCCAAAGGGTTTCATCCAGTGCGTGTGCTTTTTGTGACTGACTGTTTCCCAATTCCAAATCTCTTTACTTGCAAGGATGTTATACAGCGTGACGGAAATGTCTGGCTTTATGAACCCGACCTGCATAAACTCAGAGAAAAGCTGCAGTTACCAATTGGTTCATGTGAACTATCAGTTCCTTTGAAGGCTAAAGAAAATTTTCACTCTGAAAGGGCACACCGAGAAGCTTATGCAACTATCCTGCACTCTGCACATATATATGTTTGTGGAGCCATCACTGCAGCTCAAAGTATTCGAATGTCTGGTTCAACACGGGATCTCGTAATTCTTGTTGATGAAACAATCACTGATTATCATAGGGAGGGCTTGGCAGCAGCTGGATGGAAGATCCACACGATTAAAAGAATCAGGAATCCGAAAGCAGAACCGGAGGCATATAACGAGTGGAACTACAGCAAGTTCCGTCTCTGGCAGTTAACAGATTATGACAAAATCATTTTCATCGACGCTGACCTTCTTATACTCAGAAATATCGATTTCCTTTTTGAGATGCCTGAAATATCAGCCATAGGAAACAATGCTACACTGTTCAACTCAGGTGTAATGGTGGTTGAGCCGTCAAATTGTACATTTCAACTCCTTATGGATCACATTAATGAGATTGTGTCATACAACGGTGGGGACCAGGGTTATCTAAATGAAATTTTCACCTGGTGGCATCGGATTCCAAAACACATGAACTACTTGAAGCACTTCTGGGAAGGTGACGAGGAAGAGAAGAAGGCGACAAAAACTCGTCTCTTTGGAGCCGATCCACCGATCCTTTATGTCATCCACTATCTAGGTAATAAACCATGGCTTTGTTTCCGAGACTATGACTGCAACTGGAACGTGGACATTCTTCAGGAATTTGCGAGCAATGTAGCTCATGCAAGGTGGTGGAAGGTTCATGATGCCATGCCAGAAAACTTGCAGAAGTTCTGTTTGCTTAGATCAAAACAGAAGGCGGCACTAGAGTGGGATCGAAGACAAGCTCAGAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACCGGCGTTTGAAAACATGTTTCGAAGACTTCTGCTTCTGGGAGAGTATGTTATGGCATTGGGGTGAAAAGAATTGGACAGACAATTCTACTGTTAACACTTTACCACCTGCTGTCAAAACCAAATCTCTATCTTCTTTATGA 1923 0.4176 MRGPTPNTVEPRHRLSTSFSEDTTKRRSQKNKDFKDIEKASHIPFLERSINCRPNWKFVLVIIVLGTLLTIFHPPAVYNTDHISRTTFVNNLNGELDGTDPRYASFLNIDWNQITNVLENLKDKDTYQGVGLLNFNGSEIDNWKQLVPEAEHVVLHLNYASSNFTWEDLYPEWIDEEEEYEFPMCPTLPRIQAPGKPRLDLIAVKLPCDKSGRWSRDVARLHLQIEAARLAATSKGFHPVRVLFVTDCFPIPNLFTCKDVIQRDGNVWLYEPDLHKLREKLQLPIGSCELSVPLKAKENFHSERAHREAYATILHSAHIYVCGAITAAQSIRMSGSTRDLVILVDETITDYHREGLAAAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNYLKHFWEGDEEEKKATKTRLFGADPPILYVIHYLGNKPWLCFRDYDCNWNVDILQEFASNVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAQKGNYSDGHWKIKIKDRRLKTCFEDFCFWESMLWHWGEKNWTDNSTVNTLPPAVKTKSLSSL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00989 640 MobiDBLite consensus disorder prediction 15 33 - -
Tsu01g00989 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 621 - -
Tsu01g00989 640 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 14 621 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Tsu01g00989 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Tsu01g00989 640 MobiDBLite consensus disorder prediction 1 33 - -
Tsu01g00989 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 556 IPR029044 -
Tsu01g00989 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 558 IPR029044 -
Tsu01g00989 640 CDD GT8_Glycogenin 308 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00989 Tsu-Chr1 9067274 9072239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00989 4 616 Glycosyltransferase AT1G77130 68.821 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00989 K20890 - gmx:100787339 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00989 01 9067274 9072239 Tsu01g00989 01 9067274 9072239 ECH