Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00986 ATGAAGAGTGGtaagagagaaattgagaagaAATCAGAAATAAGTTGTGTCATTGAAGAGCTTTCTATGGTGGTAATAGTTAAACCTTGTGGAGAAAATCATGAAGGTGCTTATATTCCCATTAAGCCTTTTCTTTCTATATGTTATTTGGTTCTACAAGTTCTTGATAAAATTGGGCCAACAATGGCTGTTTTGAGACAAGATGTGTATCAAAATATCAAGAGATTGGAACTGATGCATGAATCGAATCCAACAATGATTTCAAATTTggttgaaatattaaaattagaagCAAGAGAAGGCAATGCAAAGAAGGGGTCTAGCTGCAGTAAGGCCTTTGTTTGGCTCACAAGGACCTTGGAATTCACCTCGTCATTGttacaaatattatcaaaagaTCCTGAAAAGAAAATGGAGAAAGCAGTTGAAGAATCTTATGATGTAACATTAAAACCGTGGCATGGATGGATTTCATCAACTGCTTCCAGGGTGGCTCTAAAATTAGTTCCAGAAAGTAAAACATTCATTGATCTCCTTAAGACTGAAGATGAAGATTGTGACACTCTGAAGCAGAAAATGCAGATATTGGTTTCTATACTTGTGCCTTTTCTTGAAGATATCCACTGTATTTTAAGATTGTATAACTTGGACAAGCTGAAATCAACCTGa 669 0.3318 MKSGKREIEKKSEISCVIEELSMVVIVKPCGENHEGAYIPIKPFLSICYLVLQVLDKIGPTMAVLRQDVYQNIKRLELMHESNPTMISNLVEILKLEAREGNAKKGSSCSKAFVWLTRTLEFTSSLLQILSKDPEKKMEKAVEESYDVTLKPWHGWISSTASRVALKLVPESKTFIDLLKTEDEDCDTLKQKMQILVSILVPFLEDIHCILRLYNLDKLKST 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00986 222 SUPERFAMILY Glycolipid transfer protein, GLTP 34 219 IPR036497 -
Tsu01g00986 222 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 3 219 - -
Tsu01g00986 222 Gene3D Glycolipid transfer protein 5 218 IPR036497 -
Tsu01g00986 222 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 3 219 - -
Tsu01g00986 222 Pfam Glycolipid transfer protein (GLTP) 39 179 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00986 Tsu-Chr1 9025561 9028713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00986 13 204 Acyl Lipid Metabolism Gene Families AT2G34690 21.762 6.06e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00986 - - gmx:100803131 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00986 01 9025561 9028713 Tsu01g00986 01 9025561 9028713 ECH