Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00922 ATGACAACATTTGCATCCAAAACACACAATTTCCAACCTGAATTTGAAGTTACTCCAATTTATTCCAATGCTTCACCTTATGAAACATTAGGAGATCATCACCATAGTGATGCTTATTTAGCTTGTGATGATGAAATACCCACAATTGATTACTCTCTATTATTATCTAATGACTCTCAACAAAGTTCTATTGCCCTTGAATTGCTTGCCCATGCATGTGAGGAATATGGGTTCTTTTATCTGGTAAACCATACCATACCAGATGATGCactaaaaaatgttttcaaaggAGTTTCTAATTACTTTGATCCAACAACAATCGAAGAGAGAAGGATCTATAGTAAACAAGGTTCATCAGATAAAATTCGATGGGGCCTAACTGCTAATGATGGAGAAAATAGGGAATATCTCAAAGTTATTGCACATCCTCAAGATCAAGCTTTTTCATGCCCAACAATAAGCATAAGCAAAATTGTAGAAGAATATAACAAAGAAATGAGAAAGATTGTAGCTGGATTAGCAAAGGCAGTGTCAAAAAATTTGGGGTTTGATGAAAACTATATTGAAAATGTATTCAACATGAATTCAGGGTTTGATGTAATGGCCATGAATCTTTATCCACCTAACTCTAAAGCTAAGGGTCACATTGGTCTCCCTAACCACACTGATCCTGGTTTTGTTATCACACTAATGCAAGATGTAAATGGGGGTCTCCAAATTCTATCACATAAAGGAAAGTGGATTAATACTTACATTCCTCATCATGCTATACTCATCCAGCTTGGTGATCATCTTGAGATATTGACCAATGGGAAATATAAGAGTCATGTCCACCGAGTTATTGTTAACAACAACAAGGTTCAAAGGATCTCTGTAGTTACCCTACATGGACCTTCTCTTGACAATGTTATTGTACCAGCTACAGAATTTGTTGATGataaaaatccacaaaattacATTGGAATGACCTATAAAGAATCATTGGAAGCAAATGGGGGCAATGAGATCGATGTACAATCATCACTTGATCAAATTAAGCTAGtgtaa 1047 0.3448 MTTFASKTHNFQPEFEVTPIYSNASPYETLGDHHHSDAYLACDDEIPTIDYSLLLSNDSQQSSIALELLAHACEEYGFFYLVNHTIPDDALKNVFKGVSNYFDPTTIEERRIYSKQGSSDKIRWGLTANDGENREYLKVIAHPQDQAFSCPTISISKIVEEYNKEMRKIVAGLAKAVSKNLGFDENYIENVFNMNSGFDVMAMNLYPPNSKAKGHIGLPNHTDPGFVITLMQDVNGGLQILSHKGKWINTYIPHHAILIQLGDHLEILTNGKYKSHVHRVIVNNNKVQRISVVTLHGPSLDNVIVPATEFVDDKNPQNYIGMTYKESLEANGGNEIDVQSSLDQIKLV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00922 348 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 31 346 - -
Tsu01g00922 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 298 IPR005123 -
Tsu01g00922 348 Gene3D - 16 334 IPR027443 -
Tsu01g00922 348 SUPERFAMILY Clavaminate synthase-like 42 327 - -
Tsu01g00922 348 Pfam 2OG-Fe(II) oxygenase superfamily 200 297 IPR044861 -
Tsu01g00922 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 46 118 IPR026992 -
Tsu01g00922 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 31 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00922 Tsu-Chr1 8434208 8436673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00922 26 347 Glycosyltransferase AT5G59530 27.300 9.11e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00922 - - aprc:113874260 494.967