Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00912 ATGTGGTCGGTGAGAGTGATATTGGTACTATTGTTGCCATTTTTGCTTATACTACAACAAGGTAGTAGCAGTAGTACAATTGAGCAAGAGCATACTTGTCCACCTTCATCTTGTGGCAAAATATCAAACATAATTTACCCATTTCGATTAAAAGATGATCCAATTCATTGCGGGGATAGTAGGTATGAGCTATCATGTGAAAATAATGTCACaactttatatttatactcTGCAAAATATCATGTCCAGTCCATCAATTACAAGAACTTCACAATCAGACTTGTTGATCCTGGTGTTCAAGAATCTAATTGCTCTTCACTTCCTCTCAATTTCTTGTCGCAATCAAATTTCTGCGATACTTATGAACTCGGGAAGAAATATTGCACGGATCCATACCAAGCATTAGGATATCATGATGATTATGAACTTGTTTTTGAGCATATAGTATACTTGAATATGTGA 462 0.3463 MWSVRVILVLLLPFLLILQQGSSSSTIEQEHTCPPSSCGKISNIIYPFRLKDDPIHCGDSRYELSCENNVTTLYLYSAKYHVQSINYKNFTIRLVDPGVQESNCSSLPLNFLSQSNFCDTYELGKKYCTDPYQALGYHDDYELVFEHIVYLNM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00912 153 PANTHER OS01G0113900 PROTEIN 6 152 - -
Tsu01g00912 153 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Tsu01g00912 153 PANTHER OS01G0690200 PROTEIN 6 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00912 Tsu-Chr1 8348796 8349257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00912 28 95 Receptor kinase-like Gene Family AT5G38260 32.353 3.10e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00912 - - mtr:MTR_1g027180 209.149