Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00898 ATGGCGTGTCTCCGGTTGATTACACAATCACAAAATCTGAATTCCACTAATTTTATTCATCATCACCGCTTTTcctatcaacaacaacaacaacatcgcCTCAGCCTCAACTTCACCGTCACAAAAACTAATGCTCTCACTAATTCCGATCCTTCTAAAACCTTACTTGATTGTAATAAAAGTCAAGTATTTGATGCTGTTCCCATTTTATCTTGCTCTCAGGCCTATGAAAGGCTGAAAACATTCAGAGAAAAGATAAAGGGAAAGCAGCAATACCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACTGATCCAGAAGCTATGGTTATTCCTATGGATGACCACATGGTGCATAGGGGCCATGGTGTCTTTGATACTGCAGCAATATTGGACGGATACTTATACGAGCTAGATCAACACCTTGATCGCTTTTTAAATTCGGCATCAAGGTCTAAAATAGATCCCCCATTTGATCGTGAAAGTATACGAAGGATTCTCATACAAACTGTGAGTGCTTCCAAATGTAGAAAAGGATCACTAAGATACTGGCTATCAGCAGGACCTGGTGATTTTCAGCTCTCTCCCTCTGGCTGTCACCAGTCAGGGCTTTATGCAATTGTAATACAGGACCTGTCACCGGCAGCGGCTTCAGTTAAGTCCAAGGGTGTTAAAGTCATTACTTCATCTATTCCGATAAAACATCCCATGTTTGCAATCACCAAAAGTGTGAATTACCTTCCAAATGTGCTCTCGAAGATGGAGGCGGATGAAGCTGGTGCTTTTGCAGGCATTTGGCTTGACGATGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACCAAAGAGAAGGAACTTATAATGCCCCACTTCGACAAAATTCTAAGTGGATGTACAGCTAAGAGAGTTTTAACCCTTGCTGAGAGTTTGTTGAAGCAGGGTGAGCTTCAGGCGATAAGGATGAAAAATGTAACCGTCGAAGAAGGGAAGAAAGCAGATGAAATGATGCTTATTGGTAGTGGAGTTTTGGTTTGCCCTGTAGTGCAGTGGGATGACCAGGTTATTGGAGATGGCAAAGAAGGCCATATAACACAAGCTCTCTTAAATCTAATTGTCGAGGACATGAAATCAAGTCCACCTACCGTTCGTACACCGGTTCCGTATTAA 1182 0.4103 MACLRLITQSQNLNSTNFIHHHRFSYQQQQQHRLSLNFTVTKTNALTNSDPSKTLLDCNKSQVFDAVPILSCSQAYERLKTFREKIKGKQQYLAMYSSIFGGITTDPEAMVIPMDDHMVHRGHGVFDTAAILDGYLYELDQHLDRFLNSASRSKIDPPFDRESIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSGLYAIVIQDLSPAAASVKSKGVKVITSSIPIKHPMFAITKSVNYLPNVLSKMEADEAGAFAGIWLDDEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAESLLKQGELQAIRMKNVTVEEGKKADEMMLIGSGVLVCPVVQWDDQVIGDGKEGHITQALLNLIVEDMKSSPPTVRTPVPY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00898 393 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 100 382 IPR036038 GO:0003824
Tsu01g00898 393 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 69 392 - -
Tsu01g00898 393 Pfam Amino-transferase class IV 124 354 IPR001544 GO:0003824
Tsu01g00898 393 Gene3D - 71 211 IPR043131 -
Tsu01g00898 393 Gene3D - 216 386 IPR043132 -
Tsu01g00898 393 PANTHER AMINO-ACID AMINOTRANSFERASE 69 392 - -
Tsu01g00898 393 CDD PLPDE_IV 116 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00898 Tsu-Chr1 8207089 8210325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00898 K18482 - gmx:100794026 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00898 01 8207089 8210325 Tsu01g00898 01 8207089 8210325 ECH