Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00893 ATGGGTTTCATATGGTGGATTTTAGGCATAATTCACATACTTCCACTATTCATAGATTCAAACCCTTTAATCTATAGCCTAACCCCACAATCACCAATCCAATGCAACCAAACAATTTGCACCTTAAAAAACTCCTATGGAACATGGAACGACCGAAAAACATGTTATGCACTCAATGTAACATATCCAACTACAGAAGAACAACTACGTTTAGCAGTTTCCTATGTTGTTCAAAACAACCTTAAAGCCAAAATTGTCACAAAATTCTCACACACAATCCCAACACTTTCATGTCCAcaacaaaatactaaaaatGATGCCTTTTTTATTAGCACAGAAAAATATGATTCTGAGATTCAAATTGATGCTACCAATTTAGCTGTAACTGTTGATTCAGGTGTGAAACTTCGTCAATTGATTGATGAAGTTGAAAAAAATGGGTTTAGTTTGGTTGCTGCACCTTATTGGGAAGGTGTTACAATTGGAGGTGTAATTAGCACTGGTGCACATGGTAGTTCTTGGTGGGGTAAAGGTGGTGCTTTTCATGATCATGTTTTAGGGATTAATATTGTTGTTCCTGGTTCTAAATCTGAAGGGTATGCTAAGATTTTGAGGTTGGATGCACATAATCCTTTGTTTAATGCTGCCAAAGTTTCTCTTGGAGTTTTGGGTGCCATCTCCAAGGTAAAGTTATCACTTGAGCATACGTTCAAAAGAAGCATAACCTTCAATTTCACCAATGATAATGATATTGAAAATGTGTACATAGAACATGCAAAGAAGTATGAGTTTGCAGACATAACTTGGTATCCATCAAGACATACAGCTGTTTATAGATATGACTTCAGGGTTCCCTTAGATACCTCTGGTGATGGAGTCTATGATTTCATTGGATTTCAAGCTAATAACATCTTAATCTCTGAGTCAGTTAGAGCAGCAGAGAAATTGTTGGAAAACATAGGAAACACAAATGGAAAATGTTTAACAGCATCTACTACATTGGCATTCAAGAAATTAACAGCCAATGGTTTGAAGAACAATGGCTTAATCTTCACTAGCTACCCTGTAATTGGTTACCAAGGAAAATTACAAACTTCAGGTTCATGTTTATATTCATCAAAAGTAGACACATCATGTGCTTGGGATCCAAGAATCAAAGGATTGTTCTTCTATGAATCAACAGCAATTTTCCCTGCATCAAAATTTGGTGATTTTATCAATGATGtgaaaaaattaagagatataAATCCACAAAATTTATGTGGTATAGACAACTATAATGGAATTATGATACGTTACATTAAAGCCTCAGAAGCATATCTAGGACAATCAGAAGATTCTATAGTGATTGATTTCAATTATTATAGAGCAAATGACCAATTTACCCCTAGATTAAATCAAGATGTGTGGGAGGAAGTGGAACAACTTGCATTTTTTAAGTATGGTGCTAAGCCACATTGGGCTAAGAATAGGAATTTAGCATTTttaaatgtgaaaaataaatatcctaagtttaatgtttttattgatgctaaaaataaaatggatccACAAAATGTGTTTTCTGGTGATTGGTCAGATGAGATTTTGTATGGAAAGGAATTGGTAAAATTTGATGGTTGTGCTTTGGAAGGACAATGTATTTGTTCTGAAGATAGACATTGTAGTCCACAAAAAGGGTATTATTGTAATTATGGTCTTGTCTACAAGGATGCTAGAGTTTGTAGGAAATTGTCAACCTTTGTGAACACTGATTCACTCCAATGA 1767 0.3339 MGFIWWILGIIHILPLFIDSNPLIYSLTPQSPIQCNQTICTLKNSYGTWNDRKTCYALNVTYPTTEEQLRLAVSYVVQNNLKAKIVTKFSHTIPTLSCPQQNTKNDAFFISTEKYDSEIQIDATNLAVTVDSGVKLRQLIDEVEKNGFSLVAAPYWEGVTIGGVISTGAHGSSWWGKGGAFHDHVLGINIVVPGSKSEGYAKILRLDAHNPLFNAAKVSLGVLGAISKVKLSLEHTFKRSITFNFTNDNDIENVYIEHAKKYEFADITWYPSRHTAVYRYDFRVPLDTSGDGVYDFIGFQANNILISESVRAAEKLLENIGNTNGKCLTASTTLAFKKLTANGLKNNGLIFTSYPVIGYQGKLQTSGSCLYSSKVDTSCAWDPRIKGLFFYESTAIFPASKFGDFINDVKKLRDINPQNLCGIDNYNGIMIRYIKASEAYLGQSEDSIVIDFNYYRANDQFTPRLNQDVWEEVEQLAFFKYGAKPHWAKNRNLAFLNVKNKYPKFNVFIDAKNKMDPQNVFSGDWSDEILYGKELVKFDGCALEGQCICSEDRHCSPQKGYYCNYGLVYKDARVCRKLSTFVNTDSLQ 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00893 588 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 29 576 IPR010030 -
Tsu01g00893 588 Pfam FAD binding domain 60 193 IPR006094 GO:0050660
Tsu01g00893 588 ProSiteProfiles PCMH-type FAD-binding domain profile. 53 236 IPR016166 GO:0071949
Tsu01g00893 588 PANTHER GULONOLACTONE OXIDASE 29 577 - -
Tsu01g00893 588 Gene3D - 117 234 IPR016169 -
Tsu01g00893 588 PANTHER L-GULONOLACTONE OXIDASE 3 29 577 - -
Tsu01g00893 588 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 233 IPR036318 GO:0050660
Tsu01g00893 588 Pfam D-arabinono-1,4-lactone oxidase 429 527 IPR007173 GO:0003885|GO:0016020
Tsu01g00893 588 Gene3D - 392 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00893 Tsu-Chr1 8164381 8168773 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00893 K00103 - gmx:100778616 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00893 01 8164381 8168773 Tsu01g00893 01 8164381 8168773 ECH