Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00889 ATGGGTGGAGAATTTGTGTCAATGTTTCAGCTAGAAACAAAGAAATTACTATGGCTTATTGGAATCACTTTTGCAATGATCTTATCTTTTCAGTATCTTGAGCTTCCATATGGCAATGTTCTATTCTCTCTATTCTCTTCTAACAAAATACCAATATCTCAAACTATAGATACCAACAATACTATTGTTAACAATGTCACAATTTTCAATCAAGAAAATTCTACTGATGTAAAAGGTAATGCAACTAAGGATACTGTTTCGATAACTGGTTTTCTCTTGGAACCAGGATTTGATGAGTTTAACAAAAGTTCAATTGTGGATGATAGTGTTAAGAGTGTAGGTAATGTTAGTAATGCACAAAAGGTAGAAGAAAATGTTGTGTCGACAAATTTAACTCAAGGTTTTGATTCTACGACAAATGTGAGTCCGAATATAACAACTGCAGTGTTATCAAATGATGATAACAAGTCATCATTATCTCAGAAATCTATCAGTCCTGTGCCTAAGGAGAATCATGAAACTCATGCAATAATTCCACAAGTCACAACGGTTTCTGAAATGAAGAAGTTGTTGCTTCAAAGCCATGTGTCATATCGATCAATGaaacCAAGGTGGTTTTCAGATGTTGATCAAGAGTTACTGCAGGCAAGATCAGAGATTGAAAATGCGCCGATTGTAAAGAATGATCCAAAACTCTATGGTCCTATTTATCATAATGTTTCCATGTTCAAGAGGAGCTATGAATTAATGGAAGAGAGGCTCAAAGTGTATGTATACAAAGAAGGAGCTAGACCTATAATGCATTCGCCATTTCTTACAGGAATCTATGCTTCGGAGGGATGGTTTATGAAGCTGATGGAAGCTAATAAGCGATTTGTTACAAAAAATCCGAAGAAGGCTCACCTGTTTTACTTACCTTTCAGTTCTAGGATGTTAGAGGAAGCTTTGTATGTGAAGGATTCACACAGTCACAAGAACTTGATTCAATATCTACATGATTATGTTGACTTGATTGCGGCGAGATATTCTTTCTGGAACAGAACTGGAGGTGCTGATCATTTTCTTGTTGGTTGCCATGACTGGGCTCCGTCGGAAACAAGGTTGCGCTTGACTAACTGCATAAGGTCCCTCTGCAACGCCGATGTAAAAGAAGGATTTGTCTTCGGTAAAGACGCATCTCTTCCAGAAACCTACGTCCGAAACGCTCAAAATCCAACTAGAGATCTTGGTGGCAATACATTTAGAAAGAAGTCAGTACTGGCCTTTTTCGCAGGGAGCATGCATGGTTATGTGAGACCAATTCTATTAAAGCATTGGGAAAATAAAGATCCTGACATGAAAATCTTCGGAAAATTGCCAAAATCGAAAGGAAACAGTAACTACATTCATTACATGAAGAGTAGCAAGTATTGTATTTGTGCAAGAGGGTATGAAGTAAATAGTCCGAGAGTTGTGGAAGCCATTTTCTACGAATGTGTTCCGGTTATTATATCTGATAATTTTGTGCCACCTTTTTTCGAGGTTTTGAATTGGGAATCCTTTGCTGTTATTATTTTGGAGAAGGACATtccaaatttgaaaaatatactactttcaATTCCAGAAAAGAGGTATCTAAGATTGCTTATGAGGGTTAAAAAGATTAACCCGAGTTTGATTCCTAGTAGGAACAATTCTTGGTCAAGTTTTGCTTACCTCACGGCCGAACTCTGCTTTACCAAAGGCCCTTTCCCTTGA 1737 0.3685 MGGEFVSMFQLETKKLLWLIGITFAMILSFQYLELPYGNVLFSLFSSNKIPISQTIDTNNTIVNNVTIFNQENSTDVKGNATKDTVSITGFLLEPGFDEFNKSSIVDDSVKSVGNVSNAQKVEENVVSTNLTQGFDSTTNVSPNITTAVLSNDDNKSSLSQKSISPVPKENHETHAIIPQVTTVSEMKKLLLQSHVSYRSMKPRWFSDVDQELLQARSEIENAPIVKNDPKLYGPIYHNVSMFKRSYELMEERLKVYVYKEGARPIMHSPFLTGIYASEGWFMKLMEANKRFVTKNPKKAHLFYLPFSSRMLEEALYVKDSHSHKNLIQYLHDYVDLIAARYSFWNRTGGADHFLVGCHDWAPSETRLRLTNCIRSLCNADVKEGFVFGKDASLPETYVRNAQNPTRDLGGNTFRKKSVLAFFAGSMHGYVRPILLKHWENKDPDMKIFGKLPKSKGNSNYIHYMKSSKYCICARGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVIILEKDIPNLKNILLSIPEKRYLRLLMRVKKINPSLIPSRNNSWSSFAYLTAELCFTKGPFP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00889 578 MobiDBLite consensus disorder prediction 152 171 - -
Tsu01g00889 578 PANTHER EXOSTOSIN FAMILY PROTEIN 135 557 - -
Tsu01g00889 578 Pfam Exostosin family 251 531 IPR040911 -
Tsu01g00889 578 MobiDBLite consensus disorder prediction 152 167 - -
Tsu01g00889 578 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 135 557 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00889 Tsu-Chr1 8135507 8138490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00889 - - gmx:100526957 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00453 07 3496814 3499882 Tsu01g00889 01 8135507 8138490 PCT