Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00885 ATGTCCCCTGACGCCGTCGGCAACGGAGCTCTGATCCCATTCTCCGGCGACACCAACGATTCACTCGCAGTTTATCCTCTCCACCATGGTCTCGTCCGTCCAATTTCTCGCGTAGCTCTTTCCTGGTCCCGTGGAAACTCTCTCCGCGTTTCCCTTTTCGCGGAACCTTCTGGAAGCTCCGATGCTGGAGATGGTGCAAAGGTTATTGAAGTTAAGCTTGGTGGTGGAGATCCGGAAATTGATGATGCTGACTGGCGAAGAATTGCCTATGGCTCTGTTGCTCCCTTTGCGTTACTTCAAAGTCGCCGGAACTCTCTTTCTGCATTGTCAAAATCTCCGTATCATTTAGATTGGTGGGAGCATGTCCTTCAATATAGCAAGGATATAACATCGCTTCTCACAGGGCCAAAGTTGGCTCCTAATCCAATAATCGAAGATCCGAATGAAATTGTTAAGAAAAATGAGGAGCCTACATGTTTGAAAGCTGCATGGGAGTTGATGGAAATATTTTATGTGGACAAGCAATCTCAAGCATGGCTACCTGAAAGGCTTGTTGATTGGTTAGCTGATTATGATAGCCTCTTTACTAGTACACAGGAAACAATTCATGGCAAGCTTGTGGATTTTCAAAATGATCTTGTCAACATACAGGTGATTGAGGATGATCCTAGATATTGGGAAGTGATGTCATCTGCATTGTCAGTTGGTTGGCTAGATATAGTGGTGAAAATGATGCGGTTGCATGGGTCATACCAATTAGATCAGCTCAGTAAGCGCGAGTTAGAAAATGGATTAGTGGAGGCAGTTGCTGTTCTTATTTCCAAAATGCCCCGATTACGTCCTGAATCTGCTGCTGGAAATTTAGGAGAGTGCTTTAAATCCAAGCCTGACTTTACCAAAgCCTGGGAAAAATGGAGGTCACAGATTACTAAACTGGACTGCAGTCCATATTGGATTCAGTGTGATAATCAACAAACTCGTGAGGGCTTAAGAAACATGCTACAAGTTATGCTTGGTAACACCGAGAATCTCTGTACAGCTTCATGTTACTGGATGGAGTTGTatgtttctcattttttatacaTCAGGCCATTTACTACCGGAATAGAAAGCATGTATAATTTGGCCCAGAAATGCATCCAATTGAAACCACCGACCGGTACCCATAGGTTGACTGGTCTTATGATTGGAATTCTTGGAGAAAATACAGAGGTTGTTATAGCAGAAATTTCCAGAGAATTCGGTCCTTGGATGGTTGCACATGCCGTGGAATTGCTAACTGCAGGGAGTGAGGAAGCAGAGATTCTTCTACATGATGAGCGTTATAACTTGGGGGGAATCAGTATGGTGGAACTTCATCGGCTTGCATATGCTCAAGTTCTATCATCACATGCATTGACCTGGCAAATAGCTCCAATATATTTAACATCATGCATGAAGCAAGGAATGGGCTTGCTAGAGAGTTTATTGTACAGACAATCTGTTCAACATAACAACCTGTTACTTAAGAACATTGAGATATGCCGTTTGTATGAGCTTGATCATATCAGTTCAAATATCATGAAgGTTGCTGGAGTCTATCACTGGAAGCATGGTCGTAAAGGTGCTGGAGTATTTTGGCTTCAACAATCCCAAGATACAAACTGTCTTGATAGGATTGCACAACAGTTATTTGATTCAGTTGGAAAGTCAATTTCCGATGAAAGCTTCAAACAATGGGAAGGCTTAATTGAGTTATTGGGTTCTGAATCTAAACCTGCTGGGGGTCTTGAGTTTTTACACAAGTATAGAGATTTCAAAAAATCCCTTCAGATGGTATATAGTGGAAAATCGACTGATGCTGCAAGACAAGCTGTAGGCTCCCTCATACTgCTTATGAAAAATCCATCAACCCCTCAGCGCTTTTGGCTGCCCCTTCTGTTTGACTCGTTGAAGTTGCTTAATTGGAAAGATAGTCCTCTTCTCAGTGTGTCTGAGACCAATCTTCTATTGAACAAACTTCAAGAGTTATCTTTGGCGAGGCAGCGCCCACACTTCACTGAGCCTAACTTACCCCCTCAAGCACTGAGTTCTATTAGGCTTGCTCTAGCCACAAATCTTGGCCGTGCTATACTCGATGAATAG 2124 0.427 MSPDAVGNGALIPFSGDTNDSLAVYPLHHGLVRPISRVALSWSRGNSLRVSLFAEPSGSSDAGDGAKVIEVKLGGGDPEIDDADWRRIAYGSVAPFALLQSRRNSLSALSKSPYHLDWWEHVLQYSKDITSLLTGPKLAPNPIIEDPNEIVKKNEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSLFTSTQETIHGKLVDFQNDLVNIQVIEDDPRYWEVMSSALSVGWLDIVVKMMRLHGSYQLDQLSKRELENGLVEAVAVLISKMPRLRPESAAGNLGECFKSKPDFTKAWEKWRSQITKLDCSPYWIQCDNQQTREGLRNMLQVMLGNTENLCTASCYWMELYVSHFLYIRPFTTGIESMYNLAQKCIQLKPPTGTHRLTGLMIGILGENTEVVIAEISREFGPWMVAHAVELLTAGSEEAEILLHDERYNLGGISMVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLESLLYRQSVQHNNLLLKNIEICRLYELDHISSNIMKVAGVYHWKHGRKGAGVFWLQQSQDTNCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYRDFKKSLQMVYSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLFDSLKLLNWKDSPLLSVSETNLLLNKLQELSLARQRPHFTEPNLPPQALSSIRLALATNLGRAILDE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00885 707 Pfam Nup85 Nucleoporin 79 669 IPR011502 -
Tsu01g00885 707 PANTHER FROUNT PROTEIN-RELATED 11 707 IPR011502 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00885 K14304 - gmx:100785741 1184.47