Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00877 ATGAAAGTCAGAAGAGGATTGCTTGTTTATGGTAGACAAGGTCAAGAAATATATAGGAGCAGCTTAGATCCAAACGTCTGTAGAGAGGCATGTCTTTACTCTTTGGAGAGTAAGGTTCCACTTATTGCATTTTGTGAAGGTCGCTGCTTAACCCTTTTTCATGACCCACTTGTCGATTCACTTCATACAATATACCATGAGCCAAAGGCTGAGATCATGCCTTCTGTTGAACATCTTCTGGCTTCTGCAGACATACAGAAAATGATTTTCTTAGGCACTGCCCAGAGTGTGGCGGATACGTTGCGTCCATACTGGTCAGATGCAACAAAAGGTCGTGCCACTGTTGTTCAAGCTGTGCCAGACATGCTGGAAATTGTACCCTTGGGAACATGTAAAGGGAATGGAGTAGAAATACTGCTTGATCATTTGGGAGTTACTCCTGACAAGATAATGGCTATTGGTGACGGGGAAAATGATGTAGAGATGCTTAAGCTGGCTTCTTTAGGTGTTGCACTCAGTAATGGATCAGAAAAGACTAAAGCTGTGGCTAATAAAATTGGTTTAAGCAACGATGAAGATGGTGTAGCCGACGCCATCTATCGATATGCATTCTGA 615 0.4276 MKVRRGLLVYGRQGQEIYRSSLDPNVCREACLYSLESKVPLIAFCEGRCLTLFHDPLVDSLHTIYHEPKAEIMPSVEHLLASADIQKMIFLGTAQSVADTLRPYWSDATKGRATVVQAVPDMLEIVPLGTCKGNGVEILLDHLGVTPDKIMAIGDGENDVEMLKLASLGVALSNGSEKTKAVANKIGLSNDEDGVADAIYRYAF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00877 204 SUPERFAMILY HAD-like 6 202 IPR036412 -
Tsu01g00877 204 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 5 204 - -
Tsu01g00877 204 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 5 204 IPR002036 GO:0004222|GO:0006364
Tsu01g00877 204 ProSitePatterns Hypothetical cof family signature 2. 153 175 - -
Tsu01g00877 204 Pfam haloacid dehalogenase-like hydrolase 10 199 - -
Tsu01g00877 204 Gene3D - 66 203 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00877 - - ccaj:109800113 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00877 01 7965592 7969492 Tsu01g00877 01 7965592 7969492 ECH