Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00841 ATGGCGATTATCTCCGATTATCAAGATGAAGAACAAACCAAGAAACAAACTCCTccatcatcatcttctcaaCCAAAACCCTCTAAATCCATTCCATTCACTTCCACTTTCGATCCATCAAATCCAACCGCTTTTCTTGAAAAGGTTTTCGACTTCATCGCTAAAGAAAGCGATTTCTTCGAAAAAGATTCTGCTGAGAAAGTGATTTTGTCCGCCAGTCGCGCTGCGAAGGTGAAGAAAGCTAAGGTCGTTGCTGCTGAGAAAGCTAAGATTGCTGCTGAAGAGAAGGCGAAGGCTGAGAAGGTTGCGGAGGCGGCGAAGAAAGATAAGGAGGTTGAAGGTAAAGAAGACGAGAAGAAAGATGCCTTAGCTGCTCCAAATAAGGGTAATGGTATGGATCTGGAGAAGTTTTCCTGGACTCAAACGCTGCAAGAGCTCAATGTGAATGTTCCAGTGCCACATGGAACAAAATCAAGATTTCTCACCTGTGAGATAAAGAAGAACCATCTGACCGTCGGACTCAAAGGCCAGCCACCGATTATTGATGGGGAGCTATATAAATCTATCAAGCCTGATGAATGTTATTGGAGCATAGAGGATCAGAGTACTGTTTCTATTCTTTTAACCAAGCATGATCAAATGGATTGGTGGAAATGTTTGGTAAAGGGTGATCCTGAAATTAACACCCAAAAAGTTGAACCTGAGAACAGCAAACTTGGTGACCTTGATCCTGAGACTCGATCAACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAGTCTATGGGCCTTCCTACAAGTGACGAGCTTCAAAAACAGGAAATGATGAAGAAATTTATGAGCCAGCATCCTGAGATGGACTTCTCCAGGGCAAAGTTATCTTAG 885 0.4181 MAIISDYQDEEQTKKQTPPSSSSQPKPSKSIPFTSTFDPSNPTAFLEKVFDFIAKESDFFEKDSAEKVILSASRAAKVKKAKVVAAEKAKIAAEEKAKAEKVAEAAKKDKEVEGKEDEKKDALAAPNKGNGMDLEKFSWTQTLQELNVNVPVPHGTKSRFLTCEIKKNHLTVGLKGQPPIIDGELYKSIKPDECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPEINTQKVEPENSKLGDLDPETRSTVEKMMFDQRQKSMGLPTSDELQKQEMMKKFMSQHPEMDFSRAKLS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00841 294 Coils Coil 89 109 - -
Tsu01g00841 294 SUPERFAMILY HSP20-like chaperones 118 236 IPR008978 -
Tsu01g00841 294 Gene3D - 128 255 IPR008978 -
Tsu01g00841 294 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 25 292 IPR037898 -
Tsu01g00841 294 CDD p23_NUDC_like 137 221 - -
Tsu01g00841 294 MobiDBLite consensus disorder prediction 106 129 - -
Tsu01g00841 294 MobiDBLite consensus disorder prediction 1 39 - -
Tsu01g00841 294 MobiDBLite consensus disorder prediction 106 124 - -
Tsu01g00841 294 PANTHER PROTEIN BOBBER 2 25 292 - -
Tsu01g00841 294 MobiDBLite consensus disorder prediction 14 39 - -
Tsu01g00841 294 ProSiteProfiles CS domain profile. 132 221 IPR007052 -
Tsu01g00841 294 Pfam CS domain 136 210 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00841 Tsu-Chr1 7593199 7595873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00841 K25866 - gmx:100813799 362.073