Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00827 ATGTTGAAGCTGTTTCAAGAAGTGAATAAAGAAAGTAGTAAGTTACAAGAATATGTTATAGCAAAAGGAGTGAAAAAATTGGGAAAGGAAAACAAAGTTGTTGTGTGTCATAAAATGAATTATCCTTATGTTGTGTTTTATTGTCACAAAATAGAAGGAACTAAAGTTTACACCGTTCCTTTGGAAGGTGTTGATGGAAACATAGTTAAAGTTGTTGCTGTGTGTCACAATGATACATCTCAATGGAACTCTAAACATATTTCTTTCCAAATACTCAAAGTTCAACCTGGAACTGATCCAATTTGCCACTTTGTCACACAAGAACATGTTGTTTGGGTTTCTAAGTACTCTAAGTACtatgaggatgatgatgtttGGATTTCCAAGTAA 390 0.3154 MLKLFQEVNKESSKLQEYVIAKGVKKLGKENKVVVCHKMNYPYVVFYCHKIEGTKVYTVPLEGVDGNIVKVVAVCHNDTSQWNSKHISFQILKVQPGTDPICHFVTQEHVVWVSKYSKYYEDDDVWISK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00827 129 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 6 113 IPR044816 -
Tsu01g00827 129 Pfam BURP domain 6 113 IPR004873 -
Tsu01g00827 129 SMART BURP_2 1 115 IPR004873 -
Tsu01g00827 129 PANTHER BURP DOMAIN PROTEIN RD22 6 113 - -
Tsu01g00827 129 ProSiteProfiles BURP domain profile. 1 115 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00827 Tsu-Chr1 7495788 7496177 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00827 - - mtr:MTR_1g008530 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00827 01 7495788 7496177 Tsu01g00827 01 7495788 7496177 ECH