Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00823 ATGGAGTTTCATGTCTTTCACATCATTACTTTTCTCATGCTTGTGGTAATGGGAACTAATGCTGCAATGTTACCTTCTCAACTTTATTGGAAATCAATGCTTCCCAACACTACAATGCCAAAAGCCATCACTAATCTCCTAAAGCCAGCTGcTGAAGTTGGATATTGGAGTGTAGCTGAAGTTGCACCTCAACAAGCtggattaatatatttatacgCTATtgcatattttactatatatgCTCGAGCTGGTCATAACATGTCAAATTCAGCTAACTTCTTCTTGGAAAAGGATTTTCATGATGGTAAAAAATTGAGCATGATATtctcaaaaacaaattataatgtTTCAAAATTCATGCCTAAAGAGATTGCTGATTCAATACCTTTATCATCAAACAAAATGGAAAACATCCTTCATAAATTCTCCATCAAGAAAGGATCAAAGGAATATAAAATTGTGAAAAACACAATCTATGAGTGTGAATATAAGGCTATCAAAGGAGAGGAAAAGCTTTGTGTAACATCATTAGAATCAATGGTTGATTTTGCTATTTCGAAACTCGGAAACAATGTTGAAGCTATTTCAACAGAAGTGGAAAAAGAAAGTAATGAGTTGCAACAATATGTAATATCAAAAGGAGTTAAGAAATTGGGAGAGGATAATAAAGTTGTAACGTGTCACACAGAGAAATATCCTTATGCAGTATTTTATTGTCACAAAACAAATGGAACTAATGCTTACTTTGTGCCTTTGGAAAGTGTTGATGGAAACAGAGTTAAAGCTGCTGCAATTTGTCACACTGATACTTCACAATGGAATCCTAAACATTTGGCTTTTCAAGTTCTGAAAGTTCAACCTGGAACTGTTCCAATTTGTCACTTTCTCCCACAGGATCATGTTGTTTGGGTTTCCAAGTAA 921 0.3279 MEFHVFHIITFLMLVVMGTNAAMLPSQLYWKSMLPNTTMPKAITNLLKPAAEVGYWSVAEVAPQQAGLIYLYAIAYFTIYARAGHNMSNSANFFLEKDFHDGKKLSMIFSKTNYNVSKFMPKEIADSIPLSSNKMENILHKFSIKKGSKEYKIVKNTIYECEYKAIKGEEKLCVTSLESMVDFAISKLGNNVEAISTEVEKESNELQQYVISKGVKKLGEDNKVVTCHTEKYPYAVFYCHKTNGTNAYFVPLESVDGNRVKAAAICHTDTSQWNPKHLAFQVLKVQPGTVPICHFLPQDHVVWVSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00823 306 SMART BURP_2 91 306 IPR004873 -
Tsu01g00823 306 PANTHER BURP DOMAIN PROTEIN RD22 15 304 - -
Tsu01g00823 306 Coils Coil 185 205 - -
Tsu01g00823 306 ProSiteProfiles BURP domain profile. 93 306 IPR004873 -
Tsu01g00823 306 Pfam BURP domain 93 304 IPR004873 -
Tsu01g00823 306 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 15 304 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00823 Tsu-Chr1 7462507 7464058 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00823 - - gmx:100272209 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00823 01 7462507 7464058 Tsu01g00823 01 7462507 7464058 ECH