Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00820 TTCTCACAGTGCAAACCGCTTCATCCTCTTTTTCAAATTCCCGCTGAACACCAAAACATTCAATTCGAACAATTCTTCAACGTTCATGGCTTCTCATCTTTATTAATCCAACACCACTTCCTTCCTCCTCCGTCTCCGCACACCACCACTTCCACCACCATGTCTTCTTCTTCCCCTCGGAATCGCCTCAACCAGTTTTATACTACGAAGAAAAGGAAAGCGATTTCGCCTGTTACGAAGTTAGGGAAAATTGAGAAAGGTGCTAAGATTGTGGCTGATGGGTCTCCAAGTGCTAAAGGTTCATTAGAAAATTACTTGGTTCCGTCACAGGGTGAAACCGATGAGGATCCGGTGAGGCCGGATTTGGTTAGGAGAAAATTGGGATTAGATATTGGTAGTTCTGTTGACAATGGACTTGATAAGCAGCCGGTTTCATTAGCTCGAGAGGTTCAACGTTCTTATGCTACTCGAGCTGGGATTGAAAATGAAGTGTCTGTGGTTGATGATTCTGTTCAGGAAAAGAACTTAGGTGATTTTGAACATGGCGGTGAAAAATCGGAGCTCAAACAGTTTAAAGCAGAACTTTTTTCTCTCTATTGCCGTGAACTGCCCCCGGGCATTAGTTCACCATTGGAGATGGGAGTGAAAGGCCATAAGAGACATGATTCTTTGACAATAGTAGAGGAAGATAGTAGTATGCCGCAGAAGTGTGATGACACCAGTGAGCAACATTTTGGTCGTGAAAACATTTCGAGTGACAAGATCTATAATACTATGAAAAGTGTTCCAGTCTGCTCTGCAAAGGTTTCTGATGGTGGTGATACTAATGCCTTTGATACAGGTTTTAGAAAATGCAGTAATACTCCTATGTCTATGAATATGGCTGAATGTCAAACACCAGCATCTTTGATTGTTAAAGCATGTGTTAAGGAAACTCCAAAGTCAACGCGTGGAAGCTCAATGTTTTCACCCGGAGAGGCTTTCTGGGAGGAAGCAATTCAACTTGCTGATGGTTTGGCTGTTCCCATGGGTAATGATTCTTCTAAGGTTATGGAAGAAAGTAATGTGACGGGAGGCCAAGTTGAGATGAAGAACTCGtgtaatttacaaaattatgaTGGTAAGGCAAGGAAGATATTGGATCAAAGTAAACACATAGGGTTGACTGAGATGCACACAAAAGATTCTATAAAAGAAGCATCCAGCCTTCCTGTTAAGCATTTTGATTTTTCGTATGAGGACAATAATATGGACGAAAATACCCTTCAAAATTGTCGTGTCGATAATCTGGTCAATGTTACTCGTGTGGCTGGAAAGCAGTATGAATCTATTTCTATGGCAAGTCATACATATGAACAGACATATAAAGTGAAGGAGAAGATTTTAGCAGATTCATCAGGCAACAGAGTGAGAAAGGATAGTTTTTTCAATATAACAtctaataattttaattcacccAACAATGAGGCCAGGACAACAATTAATATACATGCATCTCTTGAAGCCAAAACTCCTTCAAGTCATGTGTCACTTGATGTTCAGTTAGACCTACATAGCTGGCTTCCACCTGAAATATGCAACATATATAGAAAGAAAGGCATTTCAAAACTTTACAATTGGCAGgTTGACTGCCTTCGGGTGGATGGTGTCCTACAAAGAAGAAATCTTGTGTATTGTGCTTCTACAAGTGCTGGAAAGAGTTTTGTTGCTGAGATTTTAATGTTACGGAGGGTGATAACAACCGGAAAAATGGCAATACTTGTTCTTCCGTATGTATCGATTTGTGCAGAAAAGGCAGAACATCTTGAAAAACTGCTTGAGCCACTTGGTAAACATGTTCGTAGTTATTATGGGAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTATGCACAATAGAGAAGGCAAACTCACTAATCAATAGATTATTGGAAGAGGGCCGTCTGTCAGAAATGGGAATCATTGTGATAGATGAACTGCATATGGTGGGTGATCCACGTAGAGGTTATCTTCTAGAACTTATGTTGACAAAGCTTCGCTATGCAGCAGGGGAGGGCATTTCAAAATCAAGTGATGGAGAGAGCTCAGGTGGAAGCAGTGACAGGACTGATCCTGCTCAAAGTCTGCAAATTGTTGGAATGAGTGCGACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTACAAGCAGCATTATACCAGACAGAGTTCCGGCCAGTTCCTTTAGAAGAATATATTAAAGTTGGTAATTCCATTTATAACAAGAGTATGGAACTTTCTAGAACAATCCCAAAAGGAGCTGACCTTGGTGGCAAGGATCCAGATCATGTTGTTGAACTCTGTAATGAGATTGTTCAAGAGGGACAGTCAGTGTTAATATTTTGCTCTAGCCGCAAGGGTTGTGAATCAACTGCAAGACACGTTGCAAAGTTCCTTAAAAGCTTTACTGTTGATATTAATGAGAATAATTGCGAGTTTGCTGATATTACTTCTGCTATTAACTCCTTGAGAAAGTGCCCTGCTGGGTTGGACCCCATATTCGAAGAAACTCTTCCAGCTGGTGTTGCATTTCACCATGCCGGCCTTACGGTTGAGGAACGAGAGATTATTGAAACTTGTTATCGGAAAGGTCTTTTACGTGTCTTAACTGCCACTTCGACCTTAGCAGCCGGAGTTAATCTACCAGCTAGGAGGGTAATTTTCCGCCAACCTAGAATTGGTTGTGATTTTATTGATGGGACAAGGTACATGCAGATGGCTGGTCGTGCTGGTCGAACTGGAATCGATACCAAAGGAGAAAGTGTACTCATCTGTAAACCTGAAGAGTTAAAAAAAGTTATGGGACTTCTGAATGAAAGCTGTCCACCATTACATTCCTGTTTATCTGAAGATTTAAATGGAATGACTCATGCGATCTTAGAAGTGGTTGCTGGAGGCATAGTTCAAACTGCTAATGACATTAACCGGTATGTTAGATGTACTCTTTTGAACTCCACGAGACCATTTCTAGACGTGGTAAAATCTGCTCAAGAATCTCTAAGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAGTGAAGACACTAAACTCTACAGTACTACACCTCTTGGACGTGCATCTTTTGGCAGTTCTCTCTGTCCGGAAGAATCACTTattGTGTTGGCTGATCTTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACTTGCATTTGGTTTACTTGGTGACACCAATCAACGTTGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGTTTTGTGAAATTGTCTCCTCTTGATCAGTCAGTTGGCAATCGAGTAGGTGTGACAGAACCATTCTTGATGCGTATGGCACATGGTGGACCAATGGGTTCAAACAAGACAAGGTGGTCGCACAATAAACGGAAAAATCAACATGGGATCTCCAGTGGAACTGTTAACTCAGATGATCAAACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTCATTTTATCACATTTAGTACAGGAAATTCCTGTGGGCGAGGTTTGTGAAGCATTTAAAGTTGCTAGAGGAATGGTTCAAGGTTTGCAAGAAAATGCTGGTCGGTTTGCATCTATGGTTTCTGTGTTCTGTGAGAGGTTGGGGTGGCATGATCTTGAAGGCTTAGTCTCCAAGTTTCAAAACCGTGTGTCATTTGGAGTTAGAGCAGAAGTTGTTGAGCTTACCACCATTCCCTTTGTTAAAGGCTCTCGAGCAAGAGCACTCTACAAAGCAGGTTTACGCACACCTCTTGCAATTGCTGAAGCATCCATTCCTGAAATAGTAAAAGCACTTTTTGAATCGTCATCATGGGCCACAGAAGGTTCTGCACAAAGGAGCTTACAATTTGGTGTAGCAAAGAAGATAAAGAATGGTGCTCGAAAGATTGTTCTCGATAAAGCTGAAGAAGCAAGGGTTGCTGCTTTCTCAGCCTTTAAGTCACTTGGATACGATGTCCCACAGTTAGCTCCACCCATATCGACTGTTGCACGTGATTCTTTGAGGAAAGAAGTTGGAAGTTCCTCTGGAAGTGACACAGCTGACACTAGTCATAGCTTTGTTGATGCAAATCACATTGAGAATTCTAATATTAATATAGTTgctttagaaaaagaaaaggattttATTAAGTCATCTGACAATGGTACTGTAGCTTCTGTAGAAGGAAAATCAGACAGTGTGATGCCATGTAGTTTGTCTACTGTTCCAGTTGTAGTACCTACAACAAATGAGCTCAGTATGACTTTTGGTTCTACCAAAATTCCTGATGTTACCGCCCTCTCTGTTCAGTTACAGAAAGAAAATTTCAAGTCCAGTATACATGATGGATGCCATGCTCATGGTACAGGGGAACAAGATGATAGGGGGAATTTGGCTAGTGGTAACATGGATAGTTCTAGCCGGAAAGGACCCATTAATGCAGTTAGTAGTCCTGGCGGGCTTGATTCATTTTTAGATCAATGGGATACAGTACTAGAGTTCTACTTTGATATCCATTACATCAAACGATTGGAATTGCACTCTGCTGCTCCTTTTGAAATACATGGGATTGCCATCTGTTGGGAAAATTCTCCCATGTACTACATTAATCTTCCCAGGGATATTCTGTTGTCTGGCAATAGAAAAGACGACGGGTTTTCCTTGAGTGCATGCAGCTATAAGCAGAAAGTTTCATCATCTAATTCTAAGCAAGATTTTATAAATGCCACGAATAGATGGAGCAGGATTTGCAAAATAATGGAGAAAAGAAGTGTCAGAAAGTTCACCTGGAATTTGAAGGTTCAGATTCAGGTGCTAAAAAAGCCTTCAGTTTCAATTCAGAGGTTTGGTTCGTTGGACACACTTGGTAAAAATATGGACCTTGAAGTTGTAGACAATTCTTACTTATTGTTGCCCCCAATGCATGTTAAAGATGCAATTGACATGTGCATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGCAGCTCTAGTCCAAACCTGGATAAGGAGGTAAAAAAAAGGTTATCTCCCGAGGATGCAGCAGCAGCTAATCAGTGTGGCAGGTGGAGGAATCAGATGCGAAAAGCTGCTCATAATGGTTGCTGCCGCCGGGTTGCTCAAACCCGAGCATTATGTTCTGTTCTTTGGAAATTGCTTGTTTCTGAGAAACTTGTAGAAGTGCTTATGGAAATAGAAATCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATCGGTGTTGATTTGGAGAGATGCATTCAGGCTCGCAAATTGTTGGTGAAAAGGCTGAAGCAACTTGAAAAGGAAGCTTACAAACTGGCTGGAGTGACGTTTTCTTTGAATATGCCAGCAGATATTGCAAAGGTGCTGTTTGAACACTTGAAGCTGCCCATACCCGATGggaaaaaaaagggaaaaagccATCCAAGTACTGACAAACACTGTTTGGATGCACTAAGGAATGAACATCCCATTGTTCCAATCATCAAAGAACACCGAACATTGGCAAAGCTCCTGAACTCTACACTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAGAAGTACACATTACATGGTCGTTGGCTCCAGACATCCACAGCAACTGGACGGCTTTCAATCGAGGAACCTAATCTTCAGTGTGTTGAGCATGCAGTGGACTTCAAGATGAAAGGAGACAAAAATGGAGGCGATGCTGATGAGAATTGTAGAGTCAATGCCCGTGACTTCTTTGTTCCTACTCAGGATAATTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGGCTGATGGCACATTTCTCTAAAGATTCTTCACTTATAGAACTTCTTAGTAAGCCTGACGGTGACGTCTTTACAATGATAGCAGCAAGATGGATTGGGTGTCCAGAGGTTTCTGTAGGTTCTCAGCAGAGAGAGCAGACCAAAAAGATGGTGTACGGCATTCTTTATGGTATGGGTCCAAATAGCCTTGCAGAACAAATGGATTGCACTTCTGATGAAGCTTCTGAAAGGATTAGTAACTTCAAAAGCACTTTTCCTGGTGTTGCTTCTTGGCTCCATGAAGCTGTTGCATTTTGTCGTAGTAAAGGATATGTGGAGACTCTCAAGGGAAGGAAAcgatttttgtcaaaaataaaatttggcaGCAGTACAGAAAAATCAAAAGCTCAGAGGCAAGCTGTCAATTCCATTTGTCAgGGATCTGCTGCTGACATAATTAAAATTGCAATGGTTAAAATTTACTCTGAAATTGTTACTGGAGTTGATAGCCTGGATTCAGGTTCTTCAGTCACAACCAAGTTCCACATGCTTAGAGATCGTTGCCGGATTCTGTTACAGGTACACGATGAATTAGTGCTGGAAGTTGACCCTTCTGTGGTGAAAGAAGCTGCACTACTTTTGCAGACCAGCATGGAGAATGCAGTCTCACTTCTTGTTCCCCTGAATGTCAAATTAAAGGTTGGAAGAACATGGGGGTCTTTGGAGCAATTTGCACCTGATAAATTCAACGTTGACACTCCCATCGCTGAATCCTGA 6579 0.4109 FSQCKPLHPLFQIPAEHQNIQFEQFFNVHGFSSLLIQHHFLPPPSPHTTTSTTMSSSSPRNRLNQFYTTKKRKAISPVTKLGKIEKGAKIVADGSPSAKGSLENYLVPSQGETDEDPVRPDLVRRKLGLDIGSSVDNGLDKQPVSLAREVQRSYATRAGIENEVSVVDDSVQEKNLGDFEHGGEKSELKQFKAELFSLYCRELPPGISSPLEMGVKGHKRHDSLTIVEEDSSMPQKCDDTSEQHFGRENISSDKIYNTMKSVPVCSAKVSDGGDTNAFDTGFRKCSNTPMSMNMAECQTPASLIVKACVKETPKSTRGSSMFSPGEAFWEEAIQLADGLAVPMGNDSSKVMEESNVTGGQVEMKNSCNLQNYDGKARKILDQSKHIGLTEMHTKDSIKEASSLPVKHFDFSYEDNNMDENTLQNCRVDNLVNVTRVAGKQYESISMASHTYEQTYKVKEKILADSSGNRVRKDSFFNITSNNFNSPNNEARTTINIHASLEAKTPSSHVSLDVQLDLHSWLPPEICNIYRKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMAILVLPYVSICAEKAEHLEKLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGISKSSDGESSGGSSDRTDPAQSLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTIPKGADLGGKDPDHVVELCNEIVQEGQSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGLDPIFEETLPAGVAFHHAGLTVEEREIIETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPEELKKVMGLLNESCPPLHSCLSEDLNGMTHAILEVVAGGIVQTANDINRYVRCTLLNSTRPFLDVVKSAQESLRWLCQRKFLEWSEDTKLYSTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGGPMGSNKTRWSHNKRKNQHGISSGTVNSDDQTLRVCRRFYVALILSHLVQEIPVGEVCEAFKVARGMVQGLQENAGRFASMVSVFCERLGWHDLEGLVSKFQNRVSFGVRAEVVELTTIPFVKGSRARALYKAGLRTPLAIAEASIPEIVKALFESSSWATEGSAQRSLQFGVAKKIKNGARKIVLDKAEEARVAAFSAFKSLGYDVPQLAPPISTVARDSLRKEVGSSSGSDTADTSHSFVDANHIENSNINIVALEKEKDFIKSSDNGTVASVEGKSDSVMPCSLSTVPVVVPTTNELSMTFGSTKIPDVTALSVQLQKENFKSSIHDGCHAHGTGEQDDRGNLASGNMDSSSRKGPINAVSSPGGLDSFLDQWDTVLEFYFDIHYIKRLELHSAAPFEIHGIAICWENSPMYYINLPRDILLSGNRKDDGFSLSACSYKQKVSSSNSKQDFINATNRWSRICKIMEKRSVRKFTWNLKVQIQVLKKPSVSIQRFGSLDTLGKNMDLEVVDNSYLLLPPMHVKDAIDMCIVAWILWPDEESSSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEKLVEVLMEIEIPLVNVLADMELWGIGVDLERCIQARKLLVKRLKQLEKEAYKLAGVTFSLNMPADIAKVLFEHLKLPIPDGKKKGKSHPSTDKHCLDALRNEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVSTQKYTLHGRWLQTSTATGRLSIEEPNLQCVEHAVDFKMKGDKNGGDADENCRVNARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLIELLSKPDGDVFTMIAARWIGCPEVSVGSQQREQTKKMVYGILYGMGPNSLAEQMDCTSDEASERISNFKSTFPGVASWLHEAVAFCRSKGYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNSICQGSAADIIKIAMVKIYSEIVTGVDSLDSGSSVTTKFHMLRDRCRILLQVHDELVLEVDPSVVKEAALLLQTSMENAVSLLVPLNVKLKVGRTWGSLEQFAPDKFNVDTPIAES 2192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00820 2192 SMART polaultra3 1918 2140 IPR001098 GO:0003677|GO:0003887|GO:0006260
Tsu01g00820 2192 Pfam DEAD/DEAH box helicase 550 723 IPR011545 GO:0003676|GO:0005524
Tsu01g00820 2192 Gene3D - 520 742 IPR027417 -
Tsu01g00820 2192 Gene3D Taq DNA Polymerase; Chain T, domain 4 1752 1863 - -
Tsu01g00820 2192 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 547 739 IPR014001 -
Tsu01g00820 2192 Pfam DNA polymerase family A 1759 2173 IPR001098 GO:0003677|GO:0003887|GO:0006260
Tsu01g00820 2192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 944 IPR027417 -
Tsu01g00820 2192 MobiDBLite consensus disorder prediction 1127 1149 - -
Tsu01g00820 2192 CDD SF2_C_Ski2 741 942 - -
Tsu01g00820 2192 PRINTS DNA-polymerase family A (pol I) signature 2044 2055 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 PRINTS DNA-polymerase family A (pol I) signature 2123 2136 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 PRINTS DNA-polymerase family A (pol I) signature 1985 2010 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 PRINTS DNA-polymerase family A (pol I) signature 1869 1891 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 PRINTS DNA-polymerase family A (pol I) signature 2022 2033 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 PANTHER DNA POLYMERASE THETA 537 2180 - -
Tsu01g00820 2192 Pfam Helix-turn-helix domain 935 1026 IPR046931 -
Tsu01g00820 2192 Gene3D - 1939 2083 - -
Tsu01g00820 2192 Gene3D - 1878 2172 - -
Tsu01g00820 2192 PANTHER DNA POLYMERASE I 537 2180 IPR002298 GO:0003887|GO:0006261
Tsu01g00820 2192 MobiDBLite consensus disorder prediction 1346 1365 - -
Tsu01g00820 2192 SMART ultradead3 533 752 IPR014001 -
Tsu01g00820 2192 SUPERFAMILY Sec63 N-terminal domain-like 1153 1270 - -
Tsu01g00820 2192 CDD DEXHc_POLQ-like 521 742 - -
Tsu01g00820 2192 MobiDBLite consensus disorder prediction 1467 1484 - -
Tsu01g00820 2192 Gene3D - 752 951 IPR027417 -
Tsu01g00820 2192 Pfam Helicase conserved C-terminal domain 780 930 IPR001650 -
Tsu01g00820 2192 Gene3D - 1127 1256 - -
Tsu01g00820 2192 SUPERFAMILY DNA/RNA polymerases 1730 2175 IPR043502 -
Tsu01g00820 2192 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 779 979 IPR001650 -
Tsu01g00820 2192 Gene3D - 1485 1749 IPR036397 GO:0003676
Tsu01g00820 2192 Coils Coil 1757 1777 - -
Tsu01g00820 2192 SMART helicmild6 848 930 IPR001650 -
Tsu01g00820 2192 MobiDBLite consensus disorder prediction 1452 1484 - -
Tsu01g00820 2192 CDD DNA_pol_A_theta 1752 2175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00820 Tsu-Chr1 7377967 7393277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00820 K02349 - gmx:100813857 3246.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00820 01 7377967 7393277 Tsu01g00820 01 7377967 7393277 ECH