Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00807 ATGGAAGGCTTGTGGGTGAAACTTGGGCAATATATGTCAACGCGTGCAGATGTTCTTCCTCCagcttatataaataatttgaagCAGTTACAGGACTCCCTTCCTCCGCGGCCCTTGGAAGAGGTCTATGGCACCATACAGAAAGAGTTGGGGAAATCAATGGATGAgctatttttggattttgtcaATGAACCTTTGGCAACAGCATCAATAGCCCAAGTCCACCGTGCAACTCTGCTCGATGGACAGGATGTAGTTGTTAAGGTTCAACATGATGGCATCAAGACAGTCATACTGGAGGATTTGAAAAATGCGAAGTCAATTATTGACTGGATTGCATGGGCTGAGCCACAATATAACTTTAATCCTATGATTGACGAATGGTGCAAAGAAGCTCCTAAAGAACTTGACTTCAATCTTGAAGCTGAAAACACTAGGACTGTAGCAAAAAATCTTGGCTGCAGAAACCAACATGATGGAAATTTGAATCCCAATAGAGTGGATGTTTTAATTCCTGATGTAATTCAGGCTACAGAAAAGGTCCTTGTTTTAGAGTACATGGATGGTATTCGGTTGAATGATTTAGAATCCCTAGAAGCATATGGAGtagataaacaaaaaattgttgagGAGATTACTCGTGCCTACGCCCACCAAATATATATTGATGGGTTTTTCAACGGTGATCCTCATCCAGGAAACTTTCTTGTGAGCAAGGAATCTCCACATCGTCCCATTTTACTTGACTTTGGGCTTACGAAGATACTTTCAAGCACCATTAAGCAAGCACTTGCGAAGATGTTTTTGTCATCTGTTGAGGGGGACCATGTGGCCCTTCTGTCCGCCTTTGCAGAGATGGGGCTTAAGCTGCGTCTGGACATACCAGAGCAGGCAATGGAGGTGACAGCTATATTTTTCCGTGCAACAACACCAGCAAAAGAATCAACGGAAACAATGAAATCTCTAGacgataaaagaaaaaacaatatgaAGGTTATACAGGAGAAAATGAACCTCAACCAAAAAGAAATGAAACGCTTTAATCCTgTTGATGCATTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTCTCTGCCACCATGAACGTTACCATAGTATATATGGACATAATGAGGCCATTTGCAGAATCTGTTTTGAGTGGGTTTATTAGTAGAGGACCATCGGTAAATGATAGATGGGTTTTTGATTCCCCAGTCCATTCTAATGTTGAAGCCAAGCTGAGGCAACTTTTAATTGAGCTgggaaataatgataaaatactTGGAATCCAGGTGTGCGCCTACAAAGATGGAGAGGTCATTATTGACACTGCTGCTGGAGTGCTTGGTAAATATGATCCCCGTCCAGTTAAACCTGATAGTCTTTTTCCAGTGTTTTCTGTTACAAAGGGTATCACAGCAGGAATGGTACATTGGCTGGTTGACAACGGAAAACTAAACCTTGAAGAGAATGTTGCAAATATTTGGCCATCGTTTGGATCAAATGGGAAAGAAGACATTAAGGTTCATCATGTGCTTAACCACACATCTGGTTTGCATAGTGCAATGGCAGACTTGAGTCGAGAAAACCCTCTTCTAATTTTAGATTGGGATGAATGTTTAAAACGCATTTGTATTTCAGTGCCTGAGACTGAACCAGGAAAGGTGCAGAGTTATCATTATTTGTCATTTGGCTGGTTGTGCGGTGGAATCATTGAGCATGCATCGGGAAAGAAATTTCAGGAGATCCTTGAAGAATCAATAGTTCGTCCCCTCCAGATTGAAGGAGAATTATATATAGGAATTCCCCCAGGGGTGGAATCACGTCTTGCAGCTCTGACTGTAGATACAGATGATTTAAGCAAGCTTGCGGCGATTGGTAATCGTCCTGACCTGCCCTCCACATTCCAGCCACAACAAATTGCTCAATTTGCAACCACTCTACCTCCTCTTTTCAATACACTTAATGCTCGGCGAGCCATCATTCCTGCTGCTAATGGACATTTATCTGCCAGGGCACTTGCACGTTACTATGCTGCCCTAGCTGATGGTGGCAAGATACCACCacctcattcttcttcttctaagcCAATACTTGGAAGTCATCCCCATATCCCCAAATTATCTTCTCAGAAAGCCCCTAAAAAGCGGAAATGTATGGGAAGGGCGGTAGCAACTTTACCTGCAATTAACAAAAGTTATGAAAAAGTCTCTAGCAAAGAAGATTCTGAGATTACAGAAGGCGGAAACAATATCAGAGATAGTAGTGCTACTAGTGATGATGTCGGTAGTAGCAATGTGGATAGTAATCCACGAACCCATGTTTCTGGTAAAATATATCGGAATCCTAGGATTGTAGACAAGTTCTTGGGTACAGGAGAGTACGAGAACTTAACTTTACCGGGTGGTGGTTTTGGCTTAGGATTTAAGCGGTTTAGTTCTAAAGATGGATCGACCATTGCCTTTGGTCACTCGGGAATGGGTGGGTCTACAGGGTTTTGTGATGTTACTAACAGATTTTCTATTGCTGTGACACTGAACAAAATGTCATTTGGAGGCGTCACTGGAAAAATTGTCCAACTTGTTTGTTCAGAGTTAAACATTCCTGTGCCTGACGATTTCTTAAGATACGCAGCTCAGCAACAGGGAGATGCAAATCAGAGGCCTATGATTAATTGA 2697 0.4053 MEGLWVKLGQYMSTRADVLPPAYINNLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFLDFVNEPLATASIAQVHRATLLDGQDVVVKVQHDGIKTVILEDLKNAKSIIDWIAWAEPQYNFNPMIDEWCKEAPKELDFNLEAENTRTVAKNLGCRNQHDGNLNPNRVDVLIPDVIQATEKVLVLEYMDGIRLNDLESLEAYGVDKQKIVEEITRAYAHQIYIDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKILSSTIKQALAKMFLSSVEGDHVALLSAFAEMGLKLRLDIPEQAMEVTAIFFRATTPAKESTETMKSLDDKRKNNMKVIQEKMNLNQKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSATMNVTIVYMDIMRPFAESVLSGFISRGPSVNDRWVFDSPVHSNVEAKLRQLLIELGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGITAGMVHWLVDNGKLNLEENVANIWPSFGSNGKEDIKVHHVLNHTSGLHSAMADLSRENPLLILDWDECLKRICISVPETEPGKVQSYHYLSFGWLCGGIIEHASGKKFQEILEESIVRPLQIEGELYIGIPPGVESRLAALTVDTDDLSKLAAIGNRPDLPSTFQPQQIAQFATTLPPLFNTLNARRAIIPAANGHLSARALARYYAALADGGKIPPPHSSSSKPILGSHPHIPKLSSQKAPKKRKCMGRAVATLPAINKSYEKVSSKEDSEITEGGNNIRDSSATSDDVGSSNVDSNPRTHVSGKIYRNPRIVDKFLGTGEYENLTLPGGGFGLGFKRFSSKDGSTIAFGHSGMGGSTGFCDVTNRFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDFLRYAAQQQGDANQRPMIN 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00807 898 PANTHER ABC1 FAMILY PROTEIN 1 886 - -
Tsu01g00807 898 Gene3D - 414 732 IPR012338 -
Tsu01g00807 898 Gene3D - 790 873 IPR012338 -
Tsu01g00807 898 MobiDBLite consensus disorder prediction 694 724 - -
Tsu01g00807 898 MobiDBLite consensus disorder prediction 755 781 - -
Tsu01g00807 898 MobiDBLite consensus disorder prediction 742 781 - -
Tsu01g00807 898 Pfam Beta-lactamase 422 696 IPR001466 -
Tsu01g00807 898 PANTHER ABC1 FAMILY PROTEIN 1 886 - -
Tsu01g00807 898 Pfam ABC1 atypical kinase-like domain 29 280 IPR004147 -
Tsu01g00807 898 SUPERFAMILY beta-lactamase/transpeptidase-like 415 697 IPR012338 -
Tsu01g00807 898 SUPERFAMILY Protein kinase-like (PK-like) 31 255 IPR011009 -
Tsu01g00807 898 Coils Coil 322 342 - -
Tsu01g00807 898 CDD ABC1_ADCK3-like 29 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00807 Tsu-Chr1 7278718 7288550 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00807 K08869 - gmx:100802638 1520.37