Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00801 atGAGGATCGAACAAGAAGGTGATGGAGTTTCAGCTTCCAGAAAACATCTCGTTTTTGCTTATTACATTACTGGTCATGGTTTTGGTCATGCCACTCGAGTCACAGAGGTGGCAAGGCATTTGATCGATGCAGGACATGATGTGCATCTGGTAACTGGTGCTCCTGATTTTGTTTTCACCTCTGAAATTGAGTCTCCTAGATTATTTATTCGCAAGGTGCTTTTGGATTGTGGAGCTGTTCAGGCAGATGCTTTGACCGTTGATCGCCTCGCTTCTTTGGAGAAGTATTCTGAAACAGCAGTGAAGCCCCGAGCTAAAATCTTAGCAATAGAAACCGAATGGCTGAACTCTATCAAAGCCGACTTAGTGGTCTCCGATGTTGTTCCAGTTGCATGTCGTGCGGCAGCAGATGCTGGCATTCGTTCTGTATGTGTGACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTTCATCATCGGTCCATAGTTTGGCAGATAGCTGAGGACTATTCCCATTGTGAGTTCCTTATTCGACTCCCGGGATATTGTCCAATGCCCGCTTTTCGTGATGTCATTGATGTCCCTTTGGTGGTGAGGAGGCTGCACAAATCTGCAAAAGAGGTGAGGAAGGAACTTAACGTACCCGATGATGTGAAGCTATGTATTCTCAACTTTGGCGGGCAGCCATCAGGATGGAACATAAAGGAAGAATACTTACCTCCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTGACAACGAGGATCTTCCACCAAATTTTAGGAAACTTCCTAGAGATGCATATACGCCCGACATTATTGCAGCATGTGACTGTATGCTTGgaaaaATCGGATATGGCACTTGTAGTGAAGCCTTGGCATACAAGTGCCCCTTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGtattatCAATGTGGTGTCGAAATGATTAGGAGGGACTTAATCACCGGTCACTGGAGACCTTATCTTGAACGTGCGATAAGTTTTAAACCCTGCTATGAAGCAGGCATTAATGGTGGTGAGATGGCAGCTCACATCCTTCAGGAGACAGCTTTTGGTAAAAATTATGCATCAGATAAGCTTAGCGGGGCAAGAAGATTGCGTGATGCCATAGTTCTCGGTTATCAACTCCAAAGGGCCCCTGGCCGAGATGTTGCAATCCCAGAATGGTACGCTAAAGCGGGAGACCAACTCGACCAATCAGCAACTTCACCTGGATATGACGGAGGCTTTATATCTCATTCGGGCATTGAAGACTTTGACATTATTCACGGAGATCATCATGATCTTCCGGATACCGTGGCGTTCTTACAGAGCCTATCCGAGTTGGTTGCGAAGCACACAAAAAGGGAGCGCAAGGCTGCGGCTAATATCTTCAATTGGGAGGAAGAAATTTTCATAACGAGAGCTCCTGGAAGGTTAGATGTGATGGGTGGCATTGCTGATTATTCCGGCAGTCTTGTTCTGCAGATGCCAATTAGAGAAGCTTGTCATGTTGCTTTGCAAAGAATCGATCCCAGTAAGCATAGACTGTGGAAACACGCCGAGGCCAGACAGAATGACAAAGGCGGAAGTCCAACTGCTGTCTTGCAAATTGTGTCATATGGCTCAGAATTAGGCAACCGTGGCCCAACATTCGACATGGATTTGTCTGATTTTATGGATGGAGACAAGCCAATCTCGTATAAGCAAGCAAGAGAATACTTCGCTCAAGATCCAGCCCAAAAATGGGCTGCATATGTTGCCGGCGCAATTTTGGTCTTAATGACTGAATTGGGTGTGAAATTTGAAGATAGTATCAGCATGCTGGTATCATCTGCAGTGCCAGAAGGGAAAGGTGTATCATCTTCTGCATCTGTCGAGGTCGCTAGTATGTCTGCTATTGCAGCAGCTCATGGATTAAATATTGGTTCGAGGGATCTGGCTTTGCTTTGCCAGAAGGTGGAAAATCACATTGTAGGAGCTCCATGTGGTGTCATGGACCAGATGGCTTCGGCATGCGGTGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCCGAGATTGTTGGCCTTGTCGAAATTCCCAACCATATCCGGGTTTGGGGAGTTGATTCTGGAATAAGACACAGTGTTGGCGGTGCAGATTATGGATCTGTCAGAATTGGTACATTTATGGGTATGAAGATGATAAAGTCAAAGGCTTCTGAGGAATTGACTGAGATGTCTGCTGCAAAAGGATTGAATTCTGATGATGTTGAACAAGACGACATAGAATTACTTAAACAAGAAGCCTCCTTAGAATGCTTATGTAATTTAGCACCTCACAGATTTGAGGCTCTTTACGCTAAGGTGATTCCTGAGTCCATTCCTGGCGAGAAATTTGTGGAGCAATATAAAAATCATAATGATCCTGTCACTATTATTGATGAGAAGCGTAATTACGGAGTGAAATATCCCACAACACATCCTATCTATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTGACATCGGCAAGTTCGTCCAATCAACTTACAGCTTTAGGAGAGTTGCTATATCAGTGTCACTACAGCTATAGTGCTTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTACACTTGGTGCAAGAATTGCAGCATAGTGCAGCGTCAAAATTGGAAGGCGGGACATTATATGGTGCCAAGATCACTGGTGGAGGTTCAGGTGGAACGGTTTGTGTAATCGGTAAAAATTGTCTCAAGAGCAGCGAACAAATTATtgagGTTCAGAAGAGGTACAAAAAGGCTACCGGTTATTTACCCTTTATTTTCGAGGGCTCATCCCCAGGTGCAGGAAAGTTCGGTTACCTGAAAATTCGCCGGCGAGCTACCCCAAGAAAAGTCGACAGCTTTGCGGATGTTGCAGCCTTGGCAGAGAATGAAAGCTGA 2985 0.4489 MRIEQEGDGVSASRKHLVFAYYITGHGFGHATRVTEVARHLIDAGHDVHLVTGAPDFVFTSEIESPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAKILAIETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELNVPDDVKLCILNFGGQPSGWNIKEEYLPPGWLCLVCGASDNEDLPPNFRKLPRDAYTPDIIAACDCMLGKIGYGTCSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLITGHWRPYLERAISFKPCYEAGINGGEMAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDVAIPEWYAKAGDQLDQSATSPGYDGGFISHSGIEDFDIIHGDHHDLPDTVAFLQSLSELVAKHTKRERKAAANIFNWEEEIFITRAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRIDPSKHRLWKHAEARQNDKGGSPTAVLQIVSYGSELGNRGPTFDMDLSDFMDGDKPISYKQAREYFAQDPAQKWAAYVAGAILVLMTELGVKFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIGSRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPNHIRVWGVDSGIRHSVGGADYGSVRIGTFMGMKMIKSKASEELTEMSAAKGLNSDDVEQDDIELLKQEASLECLCNLAPHRFEALYAKVIPESIPGEKFVEQYKNHNDPVTIIDEKRNYGVKYPTTHPIYENFRVKTFKALLTSASSSNQLTALGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAASKLEGGTLYGAKITGGGSGGTVCVIGKNCLKSSEQIIEVQKRYKKATGYLPFIFEGSSPGAGKFGYLKIRRRATPRKVDSFADVAALAENES 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00801 994 SUPERFAMILY Ribosomal protein S5 domain 2-like 479 704 IPR020568 -
Tsu01g00801 994 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 972 - -
Tsu01g00801 994 Pfam Galactokinase galactose-binding signature 481 524 IPR019539 -
Tsu01g00801 994 Gene3D - 464 717 IPR014721 -
Tsu01g00801 994 PRINTS Mevalonate kinase family signature 628 650 - -
Tsu01g00801 994 PRINTS Mevalonate kinase family signature 671 690 - -
Tsu01g00801 994 PRINTS Mevalonate kinase family signature 912 929 - -
Tsu01g00801 994 PRINTS Mevalonate kinase family signature 492 516 - -
Tsu01g00801 994 Gene3D Glycogen Phosphorylase B; 238 351 - -
Tsu01g00801 994 SUPERFAMILY GHMP Kinase, C-terminal domain 716 965 IPR036554 -
Tsu01g00801 994 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 333 - -
Tsu01g00801 994 Pfam GHMP kinases C terminal 860 938 IPR013750 -
Tsu01g00801 994 Gene3D Glycogen Phosphorylase B; 21 237 - -
Tsu01g00801 994 PIRSF Gal_kin_glcsltr 1 977 IPR012369 -
Tsu01g00801 994 Gene3D - 813 950 IPR036554 -
Tsu01g00801 994 PANTHER L-ARABINOKINASE 17 972 - -
Tsu01g00801 994 Pfam GHMP kinases N terminal domain 625 690 IPR006204 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00801 Tsu-Chr1 7211645 7220461 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00801 K12446 - gmx:100306164 1694.48