Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00800 ATGGAGTACTCAAATAGTGATGGCACAAATGAGAAATTATTCATAGAAAATGGCATTTCTTcaccatcttcttcttcttctcacccCAGAAAAGGTGGTTTGAGAACCATGCCCTTTATCATAGTGAATGAATGTCTTGAGAAAGTGGCAAGTTATGGAATAATGCCAAACATGATATTGTACTTGATAAATGATTATAAAATGGCTGTTGCTAAGGCTACTAATGTTCTTTATACTTGGTCTGCTATGTCCAATATCTTGTCTATTTTTGGTGCATTTTTCTCCGATTCTTACTTGGGTCGCTTCAATGTCATCTTCATCGGTTCCTTCTCTAGCCTTCTTGGTTTAACCATTTTGTGGTTAACTGCCATGATCCCGATGCTAAAACCTTCTTGCGCATCACTCATTGAAATCTGCAGCTCTGCTACATCATCTCAACAAGCAGTTTTGTTCCTTTCGTTAGGATTAATTTCAATTGGAGCTGGTTGTGTTAGACCTTGTTCCATAGCCTTTGGAGCCGATCAACTGGCTATTAAGGAAAATTCAGATAATGGTAGAATCTTGGATAGCTACTTTAATTGGTATTATACATCAATTGGAGCTTCAACCATTATTGCATTGAGTGTGATTGCTTACATTCAAGAAAACCTAGGATGGAAAATCGGGTTTGGAGTACCTGCGGTACTAATGCTGATTTCAGCTTTCAGTTTCGTTATTGGTTCACCGTTCTATGTCAAAGTGAAGCCAAGCGAGAGCTTATTCACTAATTTGGTAAGAGTAGTTGTTGTGGCCACAAAGAACAGAAAGCTTAGTCTTCCTGATCACAACTTTAATCTGTACTGTCAAGGCGATGATTCAGAGCTGACGGTCCCTACCGATACTCTTAGGTTTTTGAACAAAGCTTGCGTAATAAGAAATCACGAGACAGACCTAAACCCAGATGGATCAATTTCAAACCCGTGGAACCTATGCACAATAGGACAGGTGGAATCGCTGAAATCTTTGCTCAGAATCCTTCCTATGTGGTCTACGGGAATCTTTATGATGGCGACTCAGAGTTCATTTTCCACTCTTCAAGCCAAAACCATGAACCGAAGGTTATTCGGCAATTTCAATTTTCCTGCAGGATCGTTCAATCTTATCATGATACTCACCTTATCAATAGTCATTCCTTCGTATGACCGCATCGCAGTGCCTATACTAGCCAAATACACAGGTCGGCCTAGAGGATTCAGTTGTAAAGTCCGCATTGGGATAGGAATGCTGTTTGTAATTTTAGCTAAAGCAATAGCAGCTATTGTTGAAACCGTGAGACGAAGTGCAGCGATTGAACAAGGGTTTGAGGACGAACCTAACGCTGTAATCAACATGTCGGCTTTATGGCTTGTTCCGGAGTTTGTTTTGCTTGGATTCGGCGAGGCTTTCACACCAGTCGGGCTGGTCGAGTATTTCTACACTTACTTCCCGAAGAGTATGTCTAGTTTTGCAATGGCGATTTTCACGCTGGAACTAGCTGCTTCTGATGTAGTTGCAAGTGTGATTGTGAACATTGTGGACAAGGTCACTAGTACCGGAGGGAACGAGAGCTGGTTAACAACTAACATCAATAAGGGCCATCTGAATTACTATTATGCGCTACTCGCTATCTTAGGTATGATTAACTACCTCtattatcttgttatttgttGGGCTTCTGGACCCGAACACGGAGAAAAACTTGAAGATTCATCAGGAAAGGAAGATGATAAATTTGATTACAAGGAGTTACCTACATCATAG 1779 0.3991 MEYSNSDGTNEKLFIENGISSPSSSSSHPRKGGLRTMPFIIVNECLEKVASYGIMPNMILYLINDYKMAVAKATNVLYTWSAMSNILSIFGAFFSDSYLGRFNVIFIGSFSSLLGLTILWLTAMIPMLKPSCASLIEICSSATSSQQAVLFLSLGLISIGAGCVRPCSIAFGADQLAIKENSDNGRILDSYFNWYYTSIGASTIIALSVIAYIQENLGWKIGFGVPAVLMLISAFSFVIGSPFYVKVKPSESLFTNLVRVVVVATKNRKLSLPDHNFNLYCQGDDSELTVPTDTLRFLNKACVIRNHETDLNPDGSISNPWNLCTIGQVESLKSLLRILPMWSTGIFMMATQSSFSTLQAKTMNRRLFGNFNFPAGSFNLIMILTLSIVIPSYDRIAVPILAKYTGRPRGFSCKVRIGIGMLFVILAKAIAAIVETVRRSAAIEQGFEDEPNAVINMSALWLVPEFVLLGFGEAFTPVGLVEYFYTYFPKSMSSFAMAIFTLELAASDVVASVIVNIVDKVTSTGGNESWLTTNINKGHLNYYYALLAILGMINYLYYLVICWASGPEHGEKLEDSSGKEDDKFDYKELPTS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00800 592 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 26 570 - -
Tsu01g00800 592 SUPERFAMILY MFS general substrate transporter 29 562 IPR036259 -
Tsu01g00800 592 Pfam POT family 102 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu01g00800 592 Gene3D MFS general substrate transporter like domains 8 569 IPR036259 -
Tsu01g00800 592 MobiDBLite consensus disorder prediction 570 592 - -
Tsu01g00800 592 CDD MFS_NPF1_2 37 563 - -
Tsu01g00800 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 26 570 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00800 Tsu-Chr1 7206303 7209903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00800 31 585 Organic Solute Cotransporters AT1G52190 51.903 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00800 K14638 - gmx:100783985 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00800 01 7206303 7209903 Tsu01g00800 01 7206303 7209903 ECH