Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu01g00786 | ATGGCAACAAAACCTAAAGATAGTAGCACAGTTGTTGGGAATGAGAAAAAGAAGACCCCATCTTCTAATTCTCCCCTCACAGCAGCCAAAAGAACCACAAAACCATCCACAACAACAACTACTACTACCACCTCCACAACCAACAAGAGTAACTCAACCACTCCATCAGAGAAAAACAAGCCCACAACAAGTATCAGAAAGCCCAAAACTGAGACTCCAACTAAGCCTTCTCCAGTTATAAGAAAATCATTGGATAAACCACTCTCATCTTCAAACTTAACGGTAAAAACAACACAACCATCAACTTCAAGATTACACAATGCCCTTGTTTCCCCTGGCTCTAGATCTTCCAATCCTCAAGTTAAAAGCACCAACCCTTCAAAACCTATTTCAGATAAGACACCAAGTGATGCAAAAACTAAGCTAGTATGGAAAAGGGCTACAAAGAAGATCAACACCCCTAATAACAACATTGCTACTTCTAACACCACAAAGAAGGTGGTTAATTCTGCTAACCCTGCAAAGGCCAAAGCTGTGATCACAGATTCTCATTCATCAAATGTTGAAACTGTGAATGTTAAAGAAGTTACAGACCAAGAAGCTGAAGTGATAAATGTGGAGAATATAGAGCATGCATCTAATGTGATTTCACCTGATGTAAACTTGGAATTTGTACACGAGCATGAACATGGTCAGATTCTTGAGGATTCTGACCAACCTCAGAATCaaggtgatgatgatgagaaagtAATTTCTACAGTTTCAAAAGAAGAAATAGCAGAAAAGGAGCCACGAGAAGAGAAACCTGAAGTTGAGCATGAAGAGAAACAGACCAATAGTGAGAATCACCCAGGAGAAGTGGATCATTCTAAGGTTGAAAGGGAAGTTGCTGCGaatgaaaaggaagaaaatgaaagtgGGATTGTAATAGATCAAAAAAGTGAGAATCACCAGGAAGAAGTTGATCATTCTGAGGTTGAAAGGGAAGCTGCTGTGaatgaaaaggaagaaaatgaaaatgggATTGTAATAGAAGATAAAAAAAGTGAGAACAACAATGAAGAGAAACCTGAAGTTGAGCATGAAGAGAAACAGAACAATAGTGAGAATCACCAAGAAGAAGTTGATCATTCTGAGGTTGAAAGAGAAGCTGCTGCAAATGAGaaggaagaaaatgaaagtgGGATTGTAATAGAAGATAAAAAATGTGAGAACAACAATAAAGAAGAATGGGGAGGGGAAGAGAAGGAAGCTGTTGAAGGAGGGGTAAGTGAAAAAGTTGAAGAGGCTAAGGCTGAAGTAGCACAACCAAAGCAACAATTAGCAGCAAAAGGGAAGCATGAATCTCAAGTGTCTAATGATATGATTGAGGAGACTGCAACCAAGCTGTTGGGGAGGAAGAACAAGGTTCTTGCTTTGGCTGGAGCATTTCAAACTGTCATTGATCATCAAGGCAAATGA | 1461 | 0.373 | MATKPKDSSTVVGNEKKKTPSSNSPLTAAKRTTKPSTTTTTTTTSTTNKSNSTTPSEKNKPTTSIRKPKTETPTKPSPVIRKSLDKPLSSSNLTVKTTQPSTSRLHNALVSPGSRSSNPQVKSTNPSKPISDKTPSDAKTKLVWKRATKKINTPNNNIATSNTTKKVVNSANPAKAKAVITDSHSSNVETVNVKEVTDQEAEVINVENIEHASNVISPDVNLEFVHEHEHGQILEDSDQPQNQGDDDEKVISTVSKEEIAEKEPREEKPEVEHEEKQTNSENHPGEVDHSKVEREVAANEKEENESGIVIDQKSENHQEEVDHSEVEREAAVNEKEENENGIVIEDKKSENNNEEKPEVEHEEKQNNSENHQEEVDHSEVEREAAANEKEENESGIVIEDKKCENNNKEEWGGEEKEAVEGGVSEKVEEAKAEVAQPKQQLAAKGKHESQVSNDMIEETATKLLGRKNKVLALAGAFQTVIDHQGK | 486 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 227 | 424 | - | - | |
| Tsu01g00786 | 486 | Coils | Coil | 361 | 388 | - | - | |
| Tsu01g00786 | 486 | PANTHER | EMB|CAB62594.1 | 1 | 484 | - | - | |
| Tsu01g00786 | 486 | Coils | Coil | 314 | 334 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 1 | 141 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 434 | 453 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 243 | 424 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 84 | 133 | - | - | |
| Tsu01g00786 | 486 | PANTHER | CALMODULIN-BINDING PROTEIN-LIKE PROTEIN | 1 | 484 | - | - | |
| Tsu01g00786 | 486 | Pfam | Plant calmodulin-binding domain | 371 | 481 | IPR012417 | GO:0005516 | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 146 | 165 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 149 | 165 | - | - | |
| Tsu01g00786 | 486 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu01g00786 | Tsu-Chr1 | 7038236 | 7039696 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu01g00786 | - | - | mtr:MTR_1g009660 | 420.239 |