Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00774 ATGGAGTCCTTCTTCGTCAACTCTTTGTATACTGTTTCTCCTCAACTCACTATTTCGCCGCGAATCAAGCAGAATAATGTGCGGCGAGTGCGAATTTCGAATTTAGCTGCCACCACAGGAAATTCTGCTCGAAACGGCGCCGTTGTGAGGCCGCTGCAGCTGCCGAGTAACTCCAGGTCGAATAACAGTGCGCTGGAGCAACTTGATATTGAGCGTGGCGTTTGCATCCCTTTCCGCAAGTACTCACCTGAGActGTGAGGAATAAGGTATTAGAATCAAGAGGAGCtattttgtctctaattttaCGAGGAGTGGAGATAGTTTTGAGTCTGGGTTTGTATTGGTCTGCTTTGGTGTATGATTTCCTAGTTGGAAGGGATGAAGAAGTTGTTCCATTTCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCATCCTTTATTAAAGCTGGCCAGGTCCTTGCAAACAGGCCAGATATCATCAGAGAAGATTATATGAGTGAACTTTGCATTCTTCAAGATGATGTCCCTTCATTTCCAAATGAAATTGCCTTCGGTATCATAGAGGAAGAACTGGGTCAGCCCCTTGAAGCTGTTTTCAGCAGAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGTGCTACTTTACGTGCCACTGGCGAGGATGTTGCTATAAAGGTTCAAAGGCCTGAGATAGAGCCCATAATTTATCGAGATCTTTTCCTGTTTCGCACTTTAGCTTCATTCCTAAATGGCATCAGTATACAGAAACTGGGGTGTAATGCCGAGCTGATTGTCGATGAATTTGGGGAAAAGCTTTTGGAAGAGCTTGACTATACACTGGAAGCCCGCAATATTGAagattttcttgaaaattttaaaaatgaccCCACCGTCAAAATCCCTATGGTTTACAAACAACTTTGTGGGCCACGTGTATTAGTGATGGAATGGATTGATGGTATTAGGTGCACCAATCCACAGGCCATTAAAGAAGGCGGTATTGATCTAGATGGATTTCTAACAATCGGTGTGAGTGCTGCCCTTCGACAGTTGTTGGAATTTGGGTTATTTCACGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGACGGATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTCAGCAAAATAAACAGATTTTAACTGATGCTGTTGTACACGCTGTGAATGAAGACTATACTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGGCCGCAGGGACTGATGTCTCTCCAATAGTTCCTGCTTTAGAAGCAATTTGGCAGGACTCTGCTGGAAAAGGATTAGCAGATTTTAATTTTCGTAGTGTCACCGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCTGAAAGGTTTTCACTTGTAATCCGTTCTTTATTGACTCAAGAAGGCATCTGTTTTACTCTGAAGCCTGACTTCAAATTTCTCGAGGTTGCCTATCCATATGTGGCCAAGCGACTACTAACAGATCCAAATCCAGCTCTACGTGAACGACTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTAGCCAAGATGAGCAGCAATCCAGCATTGCAAGTGAAAAACAAGCAAACCCAGAGAAACTGGAAAGTTGAAAAAAAACTGGACCTTACAGACACAATCAAAGACGGAGCTCGCCTTTTCCTTGTTGATGAAGGAATCCGCCGACAGCTTCTTCTTGCTTTAACCGAGGACTCAAAGCTTCATATAGAAGAGCTTGTTGATGTGTATAGGTTGGTTGAAGATCAGATAGATATACCCTCAGTGGCCGTAGAAGTAGTTCGAGACTTCCCAACTGTTGCCAGGGATCTCCTACTTTCATGGAGCGAGTCCGTTTTATCTGATAGGTAG 1977 0.4294 MESFFVNSLYTVSPQLTISPRIKQNNVRRVRISNLAATTGNSARNGAVVRPLQLPSNSRSNNSALEQLDIERGVCIPFRKYSPETVRNKVLESRGAILSLILRGVEIVLSLGLYWSALVYDFLVGRDEEVVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMSELCILQDDVPSFPNEIAFGIIEEELGQPLEAVFSRISSETIAAASLGQVYRATLRATGEDVAIKVQRPEIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKNDPTVKIPMVYKQLCGPRVLVMEWIDGIRCTNPQAIKEGGIDLDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILTDAVVHAVNEDYTEMANDFTRLGFLAAGTDVSPIVPALEAIWQDSAGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALQVKNKQTQRNWKVEKKLDLTDTIKDGARLFLVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVVRDFPTVARDLLLSWSESVLSDR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00774 658 Pfam ABC1 atypical kinase-like domain 174 418 IPR004147 -
Tsu01g00774 658 SUPERFAMILY Protein kinase-like (PK-like) 175 392 IPR011009 -
Tsu01g00774 658 ProSiteProfiles Protein kinase domain profile. 204 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00774 658 CDD ABC1_ADCK3-like 174 420 - -
Tsu01g00774 658 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 23 658 - -
Tsu01g00774 658 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 23 658 - -
Tsu01g00774 658 Gene3D Transferase(Phosphotransferase) domain 1 203 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00774 Tsu-Chr1 6898859 6907316 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00774 - - gmx:100790292 1121.69