Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00768 ATGGAATTCAAAAGCTCATCTCTTCTCTACTTGGCTCTTTTTCTTACAATCTCATCTTCCATTCATGCATTTAACATCACAGAATTGTTAGGTGACAAGCCTGATTATGCCAACTTCAACAAATACCTCAATGAAACCAAGCTTGTCGACCAAATCAACAAGCGCAACACCATCACCGTCCTCGCCCTTAGTAATGACGCTATGTCTACCATCTCTGGCAAGTCTCCAGAGGTTACAAAGGCCATCATGAGCACCCATGTGCTCCTTGACTATTTCGATGTAAAGAAGCTCAGGCAGGTCATTATAGGTAAGGGCCGACCCTTGACCACACTTTACCAAGCCTCAGGCCTCGCCGTTAACCAACAAGGGTTCCTTAAGGCTGCACTCACAGGTGATGGTTTGATCGCCCTTGGATCCGCTGTTCCTGGTGCTCCGAAGCCCTATTCCAAGATTGTCCAAATTGTTGTTTCCCAACCTTACAACATTTCCATACTCGAAGTTAGCAGTCCTATTGTGGCCCCTGGAATTGATTCACAAGCCCCCCCACCCCCACCCCCAGTAGAGGGAGCTGAGTCTCCATCTTCAGATGAAGTGATTCCTCCTTCACCTCCCGAAGACGTCACAGACTCCCCAGCTGAAGCCCCAACACCCGATGCAGCTAGCCCATCTTTGGCTCCTGCTCCTGGTCCTGGTGATGAGGATGCTGCAGATGCCGAAACTCATCATAGCAGCTCTTCAAGGATTATTGTAGGGTTGGTTGAAGCAGTGATGTGCTTTGCTTCTCTCTTAGTTGTTATGTAG 801 0.4844 MEFKSSSLLYLALFLTISSSIHAFNITELLGDKPDYANFNKYLNETKLVDQINKRNTITVLALSNDAMSTISGKSPEVTKAIMSTHVLLDYFDVKKLRQVIIGKGRPLTTLYQASGLAVNQQGFLKAALTGDGLIALGSAVPGAPKPYSKIVQIVVSQPYNISILEVSSPIVAPGIDSQAPPPPPPVEGAESPSSDEVIPPSPPEDVTDSPAEAPTPDAASPSLAPAPGPGDEDAADAETHHSSSSRIIVGLVEAVMCFASLLVVM 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00768 266 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Tsu01g00768 266 MobiDBLite consensus disorder prediction 175 242 - -
Tsu01g00768 266 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 201 - -
Tsu01g00768 266 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 201 IPR033254 -
Tsu01g00768 266 MobiDBLite consensus disorder prediction 176 190 - -
Tsu01g00768 266 SUPERFAMILY FAS1 domain 30 119 IPR036378 -
Tsu01g00768 266 Gene3D FAS1 domain 23 159 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00768 Tsu-Chr1 6854256 6855056 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00768 - - mtr:MTR_1g009910 249.595