Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00764 ATGGCTACAGCTTATGCTTCTGCGTTTCGCTTATCACCCTGTTCATTAAAATTCAGAATCCATAATAATTATCCTACAACGCCCAAATCATTCAACCTCCGTTTCCATCCCCGTCACAACAGCTTATGCGTTTCTACTTCCGTTTCCATCTCTAACACGGATATCCAAACAGCTCCTAATGATCTCGTAGCCTCTCTTCTTTCAAAGGTGGTGCAAACAGATGGAGGAGTTTTACTACAAAAGGAAGAACATAAAGAGGTGGCCGAAGTGGTTCAGGAATTGCAGAAGTATTGTGTGAAAGAGCCTGTGAAATGTCCTTTAATATTTGGAGAGTGGGATGTAGTGTACTGTTCGCAGCCAACATCACCTGGAGGTGGATATAGGAGTGCATTGGGCAGAGTTTTCTTCAAAACAAAGCAAATGGTTCAGGTTGTTGAAGCTCCTGATATTGTGAGAAACAAAATCGAATTCACTGCTTTAGGCTTTTTGGATGGAGAGGTTTCTCTAAAAGGAAAACTGAAGGCTTTGGATACTGAATGGATTCAAGTTATATTTGAAGCACCTGAGTTGAAGTTAGGATCATGGAAAGCACAATATGGAGGTCAGAGTGAAGTTAAACTCAGAATCACTTATGTAGATGAAAAAATCAGGTTAGGATTGGGATCAAGAGAGAGTTGGAAGCAGCTTTATCATTCATTCATCACCTCTCGACTCGTGTTTGTGTTCGAAATGGGAACCGCAGCATTCCAGCTTTGTGCCGGTTTAAATTTAAGCGCTTCTAATAATGTTCATGTTCAAGGGAGTACCAATTCCAAGTTCGCTCCTCAATCAGTGAGAGCACTTCCTATACGTATATTATCTGTGGGAAAGAAGCGATCACGTGGACTGCAACTAATGGTTGACGAATATGTTGAAAAGATCAAATACTATTGCAGTGTTGAGGATGTTCTAATTCGATCAAATCCCAGAAATGCACGTGACCAAAGGGCTCAAGTTGATGATGAAGACATGGCAGTGATGAATCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACACGGAAAAGATCTACGGTCTGAGCAAATGGCAGAGTTGGTGGCTGATGCAGGAAATACTGGTGCTTCACGTATATCTTTCTGTATTGGTGGACCCTTTGGTCATGGAAGAAAAATAAGGGAACGTGCTAACTTATCAATCAAGTTATCTTCAATGGTCTTAAATCATCAAGTAGCATTACTTGTGCTTGTAGAACAGCTTTACAGGTCATGGACAATTTTAAGGGGACAAAAGTACCATCATTAG 1308 0.4083 MATAYASAFRLSPCSLKFRIHNNYPTTPKSFNLRFHPRHNSLCVSTSVSISNTDIQTAPNDLVASLLSKVVQTDGGVLLQKEEHKEVAEVVQELQKYCVKEPVKCPLIFGEWDVVYCSQPTSPGGGYRSALGRVFFKTKQMVQVVEAPDIVRNKIEFTALGFLDGEVSLKGKLKALDTEWIQVIFEAPELKLGSWKAQYGGQSEVKLRITYVDEKIRLGLGSRESWKQLYHSFITSRLVFVFEMGTAAFQLCAGLNLSASNNVHVQGSTNSKFAPQSVRALPIRILSVGKKRSRGLQLMVDEYVEKIKYYCSVEDVLIRSNPRNARDQRAQVDDEDMAVMNLIRSDDWVVMLDEHGKDLRSEQMAELVADAGNTGASRISFCIGGPFGHGRKIRERANLSIKLSSMVLNHQVALLVLVEQLYRSWTILRGQKYHH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00764 435 SFLD SPOUT Methyltransferase 252 435 - -
Tsu01g00764 435 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 281 435 IPR003742 GO:0006364|GO:0008168
Tsu01g00764 435 Gene3D - 280 435 IPR029026 -
Tsu01g00764 435 Pfam PAP_fibrillin 61 192 IPR006843 -
Tsu01g00764 435 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 8, CHLOROPLASTIC-RELATED 32 225 - -
Tsu01g00764 435 SUPERFAMILY alpha/beta knot 282 433 IPR029028 -
Tsu01g00764 435 PANTHER - 32 225 IPR039633 -
Tsu01g00764 435 CDD RlmH-like 283 435 IPR003742 GO:0006364|GO:0008168
Tsu01g00764 435 Pfam Predicted SPOUT methyltransferase 283 434 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00764 - - gsj:114394027 321.627