Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00759 ATGGCAACGGTTTCAAAGATATCGTCactattatcatcatcactagCAACACTATCATCCAAACCTAAACCTAAACTCATTCATCGTCATATCAATTCCTTTCTTCTATCTGCTTCAAATCTCACATCCCTTAGCACCACCACCGGCGGCGGAGGTATGAGAAGAATGACAAAGACGAAGAAAACAGAAGCAGCACTTGCGAAGGAAAAAAGACGAACACGTTCCGATAAACAACTCGACGAGGATACAATAGTAGAGCTTTACAACAATAATTCACATCTTCATATTCCTGTTTTGCTTTCTGAAGTTTTGGATGTCTTCTCAAATTCTTCGTTAACATCTTTCGTTGATTGTACTCTTGGTGCTGCTGGTCACTCCACCAatGTGATTAGAGGTCATCCGGAGTTGAAGTATTTTGTTGGGATGGATGTGGACCCTGTGGGAAGTGACGTAGCTCAATCACGCATCAGTTCAGTTTTGGACGATGCCAAGTCCAGTGTGAAAGTATTTACCGTGTTAAGGAATTTTAGACACATCAAGTCTGTGCTCAGAGGAACGGGTGAGGAACATTTAGGGCCATCGTCTGTTGATGGCATCTTGATGGACCTGGGAATGTCATCTATGCAGgtGGACAATCCTCAAAGAGGATTCAGTGTGCTTAGTGATGGACCACTTGATATGCGCATGGATCCTCAGGCAAGCCTTAAAGCAGAAGACATATTAAATTCTTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGGGATTATGGGGAAGAAAGTAATTGGCGTACTCTGCAGAAGAAAATTGTCCAAGCCCGTTTAGAAGGTGGATTACATTCCACTACTGACTTGCTGGATCTTATTCGGCGTGTGACTCCTGCAATGAAAGGTGGAAGACAAGGTTGGATAAAAACAGCAACCCGTGTATTTCAAGCATTGAGAATCGCTGTCAACGATGAACTGAAGACTCTCGAGGACTCCCTGTATTCTTGTTTTGACTGCCTTGCACCTGGGGGCAGACTTGCTGTCATATCTTTTCACAGTTTGGAGGACAGAATTGTGAAGCAGacatttcttaatataattaaaaggaATGATGACATTGGAGAAGGGGAGATCTGCAATAATGATCTTAGGAAGATAATTgatgaaatcaaagaaaaagaagcatGGATAAAACAAGTACTGCATGGATCAAATGGAATAATTCTCACAAAAAGACCAATCACGCCgtcagaagaagaagagaacTTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGAGTTATTCAGAAGCTTTGA 1302 0.4025 MATVSKISSLLSSSLATLSSKPKPKLIHRHINSFLLSASNLTSLSTTTGGGGMRRMTKTKKTEAALAKEKRRTRSDKQLDEDTIVELYNNNSHLHIPVLLSEVLDVFSNSSLTSFVDCTLGAAGHSTNVIRGHPELKYFVGMDVDPVGSDVAQSRISSVLDDAKSSVKVFTVLRNFRHIKSVLRGTGEEHLGPSSVDGILMDLGMSSMQVDNPQRGFSVLSDGPLDMRMDPQASLKAEDILNSWPDSEVGRILRDYGEESNWRTLQKKIVQARLEGGLHSTTDLLDLIRRVTPAMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKRNDDIGEGEICNNDLRKIIDEIKEKEAWIKQVLHGSNGIILTKRPITPSEEEENLNRRSRSAKLRVIQKL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00759 433 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 95 433 IPR002903 GO:0008168
Tsu01g00759 433 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 433 IPR029063 -
Tsu01g00759 433 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 91 432 IPR002903 GO:0008168
Tsu01g00759 433 Pfam MraW methylase family 94 432 IPR002903 GO:0008168
Tsu01g00759 433 Gene3D Putative methyltransferase TM0872, insert domain 213 320 IPR023397 GO:0008168
Tsu01g00759 433 MobiDBLite consensus disorder prediction 46 75 - -
Tsu01g00759 433 SUPERFAMILY Putative methyltransferase TM0872, insert domain 215 318 IPR023397 GO:0008168
Tsu01g00759 433 Gene3D Vaccinia Virus protein VP39 95 430 IPR029063 -
Tsu01g00759 433 MobiDBLite consensus disorder prediction 56 75 - -
Tsu01g00759 433 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 71 433 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00759 K03438 - gmx:100803819 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00759 01 6783873 6787749 Tsu01g00759 01 6783873 6787749 ECH