Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00740 ATGGGTAGTGAGAGTATTGAAATGATTCCATCTCTAGATTTTTCTATATATGATTCAAGATTTGATCAAGAGAGTGAAGAGTGGAAAAATATGAGCAAAAAAGTGAGAGAAGCATGTGAGAATTATGGTTGCTTCATCTTAATGTATGATAAAAATAAGTTCCTCTCATGTGAAAACATGATTATGGGATTGAAGGATTTGTTTGATTTACCTGAAGAAATTAAGAAGAAGCACAAAAGTAATATGCCTTATAGTAGCTACAATGGTGACTGTCCTGACATTCCCTTATGTCAAACCTTTGGAATTGAAGATACTCCCATTGGAGATAATTCTTTGGCTTTTACTAATCTCATGTGGCCTCAAGGAAATCCAACTTTCTgTGAGACAATGAAGGATATGAGCACCAAGATGGTTGAACTGCATTCCCTCATTCTAAAGATGATTGTAGATGGTTATGGTCTTCCAAAACAATATACTTCAACTATTGAAGAATTGAATTACCATAGTAGTCTTCGATTGATGAAATACAAAGTCCCTCAAATCAACAAAGATTGTGAAATTGCATTGGTATCTCACACTGACAAAAATAGTTTAACCATTTTATGCCAAAATGAAGTACAAGGTCTTGAGGTTCTtactaaagaaaataaatggaTTCAAGTGCAAATACCTCAAGGAGGATTTATTGTCATTGTTGGTGACACACTCAAGGCATGGAGCAATGGAAGACTTCATGCACCTACACACAGAGTGACTATGGGTGGAGACAAAGAAAGATACTCATTTGGACTATTTGCAATTCCAAATGAAAAGGTGAAAATTGAGGTGCCACATGAATTGGTTGATGATAAAATGCATCCTCTACGTTATCGTTCATTCACTTATGGGGATTATTTAGACTACTTTGTTTCAAATACCAATGAAAATGCATTAGAAGCATTTACAGGCATTTGA 954 0.3428 MGSESIEMIPSLDFSIYDSRFDQESEEWKNMSKKVREACENYGCFILMYDKNKFLSCENMIMGLKDLFDLPEEIKKKHKSNMPYSSYNGDCPDIPLCQTFGIEDTPIGDNSLAFTNLMWPQGNPTFCETMKDMSTKMVELHSLILKMIVDGYGLPKQYTSTIEELNYHSSLRLMKYKVPQINKDCEIALVSHTDKNSLTILCQNEVQGLEVLTKENKWIQVQIPQGGFIVIVGDTLKAWSNGRLHAPTHRVTMGGDKERYSFGLFAIPNEKVKIEVPHELVDDKMHPLRYRSFTYGDYLDYFVSNTNENALEAFTGI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00740 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 315 - -
Tsu01g00740 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 5 315 - -
Tsu01g00740 317 Gene3D - 6 315 IPR027443 -
Tsu01g00740 317 PRINTS Isopenicillin N synthase signature 228 254 - -
Tsu01g00740 317 PRINTS Isopenicillin N synthase signature 192 213 - -
Tsu01g00740 317 PRINTS Isopenicillin N synthase signature 294 312 - -
Tsu01g00740 317 Pfam 2OG-Fe(II) oxygenase superfamily 174 265 IPR044861 -
Tsu01g00740 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Tsu01g00740 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 268 IPR005123 -
Tsu01g00740 317 SUPERFAMILY Clavaminate synthase-like 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00740 Tsu-Chr1 6573390 6577330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00740 9 298 Glycosyltransferase AT5G59530 23.432 3.64e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00740 - - gmx:100817159 390.193