Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00713 ATGGCAACCACAGTAAGTATTATCTGCAAAAGAACTGTGGTGAGCACAAAGGCAATTGAACCAGGAAAATACTTACCCTTATCAGTTTTAGATCGTTTCATGGAGAAAAACCATATTAAGATGGTGTACTATTACCAAACTTCAGGAGAATTAGAGCTTGGAAAATTGACGAAGAAGTTGAGAGAAAGTTTGTCAGAAATGCTTACTCATTTCCCTATAGTGACTGGAAGGTTGTTAAGAGATGAAATGGGACATTGGAAGATCAAGTGCAATGATGCTGGTGTTAGAACATTGGAAGCAAAAGCCAAAGGAAGTGTGGAAGAATGGCTAAGAAATGTGGATAGGGAAAAGGAACTTGAACTTGTTTATTGGGAAGATATGCTTGAAAAGCCTTACTATTGGTCCACTTTTTATGTCCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCTTAAGCTGCACTCATCTCTTGGCAGATTCCATTTGTGCAACAAGATTCATGAAGGCTTGGGCTGATATTTCATTAGGCAACAAAATCACTTCACCTCCAATATTTCACCCTTTACCCCCTCAAAGATCACAAAACAAAAAGcccaataacaataacaacccTTATATGGGCTTAATATCTCACTATAAATCCTTAATTGAAAGGCCCATTTTTATCAAGGAAGCAAAGTACACTACTATTTCTATGGGCTTCTCACACCACATGGTTCAGGCTTGCATGTCCATGGCCCAATTCATTGGTTCATCAAGCCCAAGCCCAACACCCTTTGAAGCACTAGCTGGGTTGTTTTGGGTCACTTTAAGCAAAATCAAAGGGGAAAAAAATGGACTTGTTGACATGTCCATATGTTTGGATATGAGAAAAATCTTGGGCTTAGATCAAGGATTCTTTGGAAACTCAATGCTATATAATAAGGTGCATTTAGAAGAAAATTTCAATTTAGATTTAAATGAGATTAAATTTCCACAAGCTACTAGGGCCATAAGTGATGTTGTGGCTAAAATTGACAATGAGGAAATAATGGATTTAATTGAGTGGCttgaaaataattatataaattcaTCTAAAATGATGAATGGTCATGATTTGGTTATTACTAGCTTAGAGGATGTTGACCCTTATTTAGCTATGTTTCAAGATATGTTCAAACCAATTCGTTTCTCTTGTTACATAGAGCCAGTTTTTGGAGAAGGACATGTTTTGATTCTTCCAAATCCACTTGATGAGGGTCCCTTAGGGAGGGTGTCATTTTATTGTTTGATTAGGATATTTCATTTGCAACATCCATTGAAAAGACGGCCGTGTAGGATCGATGAACCGATGAAACATCTTTCGAGTGTAACCGAGTTGTTAGACGCTGGAGTGAGGTTTAAAGTGAATACGGAAAATGAGTGTTTACTTGACTTGAGATTTTTAGGACGAGTTCTTGAAATACCTCAGTTGAAAGTTGAGGATTGGACTGAGATTTTGTTTTGGAATGTGGTTGCTTTGGAGCAGTGCCATTACCCTTATGAGTCCTATATTAATGATTATGTTGCTTTGGCAAATGGCATAAATCGTTCATCATATACATCATTTTAA 1596 0.3647 MATTVSIICKRTVVSTKAIEPGKYLPLSVLDRFMEKNHIKMVYYYQTSGELELGKLTKKLRESLSEMLTHFPIVTGRLLRDEMGHWKIKCNDAGVRTLEAKAKGSVEEWLRNVDREKELELVYWEDMLEKPYYWSTFYVQLTEFEEGGLAIGLSCTHLLADSICATRFMKAWADISLGNKITSPPIFHPLPPQRSQNKKPNNNNNPYMGLISHYKSLIERPIFIKEAKYTTISMGFSHHMVQACMSMAQFIGSSSPSPTPFEALAGLFWVTLSKIKGEKNGLVDMSICLDMRKILGLDQGFFGNSMLYNKVHLEENFNLDLNEIKFPQATRAISDVVAKIDNEEIMDLIEWLENNYINSSKMMNGHDLVITSLEDVDPYLAMFQDMFKPIRFSCYIEPVFGEGHVLILPNPLDEGPLGRVSFYCLIRIFHLQHPLKRRPCRIDEPMKHLSSVTELLDAGVRFKVNTENECLLDLRFLGRVLEIPQLKVEDWTEILFWNVVALEQCHYPYESYINDYVALANGINRSSYTSF 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00713 531 Gene3D - 1 206 IPR023213 -
Tsu01g00713 531 Pfam Transferase family 5 364 - -
Tsu01g00713 531 Pfam Plant protein of unknown function 423 523 IPR004158 -
Tsu01g00713 531 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 422 - -
Tsu01g00713 531 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 422 - -
Tsu01g00713 531 Gene3D - 224 423 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00713 Tsu-Chr1 6248627 6251403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00713 12 410 Acyl Lipid Metabolism Gene Families AT3G23840 24.000 7.31e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00713 - - cam:101505678 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00713 01 6248627 6251403 Tsu01g00713 01 6248627 6251403 ECH