Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00687 ATGACTTTCTCCGCCGCATCATCTTCTCTTCGTTCTACCTCTTCTCCTTCCTACTCTCAGTTATTGTGCTCTCTTAGGTACAACAGGAAGCTTCGTagtcaaataaattttgttgtGACTCGAGGAAGAAAAGGTCGGAATGGTTGTGTTAGTGTTAGATCAGTGTTGAATGACAATAGACCTAGTTTTAACAATTATGGAACGCCGGAATCTGCTAGGCTTCTTGAGAGGTTGTTTGAACAGACGCATAAGCTGGAGGACAGGGTGACAGGAGAGGAACAGGATCTTGGTGATTTTGAGACGGATCTTTTGGCGGCTCTTATGGAATTGAAGGTGAAGGAGGATCATTTACATGAAGTGGAGAGAACTGTTTTGTTGGAGAATGGAAAATTGAAGCATGCTAAAGAGGAATTAGAGCGTCAAGAGAGTGAAATTGAGGCTGCCCGTGAGAAGTATGAGAGGCTTGAAGAGGAGATGAAGGAAGTGAGGGCTAGTTTGGTTTCTCAAGTTGGACAGGTAGATGAATTGAAGCTCCGGCTTACGGATCGTGATAATGAGATTGCTGGTTTACGGGATGCGCTGTCTTTGAAGGAAGAAGAGTTGGAGAAAATGAGGATTGGTTTGGCTAAGAAGAGTGAAGAAGCTGCTTATGTTGATTCTGAGCTTAGAAATAAGGTTCAGCTTCTGAGTGAAGCAAATGAGGTTGTGAAGAAACAAGAAATTGAGCTTAAAGAACTTCGGACAGTTGTGTTACAAAGAGAAGAAGAACTACGAGTTTCTGTGGATGAGAGGGAAGCTGAACAAGAAAAGCTCAAGATTGCGGAGGCCTCTTTGGAAAGACAGGCAATGGAGTGGTTGTTAACACAGGGGGAACTTAAGAGACTGGAAGAGGAGGCATCGAGGCATGCACTGGAGAATAGTGAAACGCTAGAGGATTTCAGAAGGGTGAAAAAGCTTCTCGGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCGTTGGCATCTTCTAGAAACAAAATGGAAGTACAAGAAAGGTTGTTGGAACAGCAGATGGCTGAACTTTCAGACCAAAGGGAAAGTGTCATGTTGTATATGGAAAATTTAAAAGATGCACAAAGAGAAGTAGAGAGTGAAAGAATGAAACTTGGGGCTGCAGAGGCTTTGAATAAAAAACTTGAACAAGATCTGTCCATGGAAAAGGAGCTCATGAAGAAGTTACAGGAGGAGCTGAAGGAAGAGAGAGCTTCTTTGGAGCAGGCTGTCCATGAATTGTCTTTGCTTCAAGAGGAATTTGATATAAAAAGTGCCGAGTTTAACAAAAAAAGTGCCCTCCTTGATATCAAAGAGTCAGAGCTTGTTGATGCCAGGCTAGAAATCCAACATTTGAAATCTGAAAAGGCTTCTCTTCTGGTTCTCTTGGAGGAGAAAGACTTGGAGCTTTCTAATGCTAGGAAGATGCTGGCAGAACTAAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAATAAAGAAACACAGCTTATTGAAGCAACCAATATGTTAAGGGAGAAAGACGAGCATGTGAAGATGATCCAGAATAAGTTGAATAATACAAGCCTGAAGGCTTTCGAGGCTGAAACTGTAGTAGAACGAGTTTTAGACCTCACAAACGAACTGGTTGCTTCCATTAAGAATGAAGAGATCAATTCATCAAGACCACTAGATGAAATGGGTGATCAACTAATGACGCAACTTATGGAGGATCCTACTAATGAATTGAGTTGGCAACAAAAACGGCTGGAGAATGCGCTCGAGTTGACCAAGGAGAACCTAAAAACAAAGGAGATGGAAGTTCTTGCTGCACAGAGGGCTCTAACAATAAAAGAAGAGGAGCTTAAAATGACTCTTGCAAGGTTGGAAGCAAAAGAGGAAGAGTTAAGAGGAGCAAAGGATAAGGCGACAGAAGATGCTAATGATCATAATATGTTGTATGCTATGATGCAGGAGAGACTCGATGAGAATAATATGGAGGACTTGGCAATTGAGAAGCTTCAGCTTGAGGCAGCACAGCTTGAAGTTGAAGCTGCTACTAGTGCTCTACAGAAAATTGCAGAAATGAGTCAACAACTTTTGAATAAAGCCATGCCGAGTGTTAAAGCTGATAGCTATATCAGTGCCATGCAAAATAACAATGATATTAAACTTGATTTAATCACAAATATCAATTGCATTGACTGTTTGGCTGTGGTGAAAGCAGGAGTCGCTCGGCTCTCGGCATTGACAGAACAGCTCGTGATGGATGCAGGTCTTCCTGCTGCAAGCTAG 2310 0.4177 MTFSAASSSLRSTSSPSYSQLLCSLRYNRKLRSQINFVVTRGRKGRNGCVSVRSVLNDNRPSFNNYGTPESARLLERLFEQTHKLEDRVTGEEQDLGDFETDLLAALMELKVKEDHLHEVERTVLLENGKLKHAKEELERQESEIEAAREKYERLEEEMKEVRASLVSQVGQVDELKLRLTDRDNEIAGLRDALSLKEEELEKMRIGLAKKSEEAAYVDSELRNKVQLLSEANEVVKKQEIELKELRTVVLQREEELRVSVDEREAEQEKLKIAEASLERQAMEWLLTQGELKRLEEEASRHALENSETLEDFRRVKKLLGDVRSELVSSQQSLASSRNKMEVQERLLEQQMAELSDQRESVMLYMENLKDAQREVESERMKLGAAEALNKKLEQDLSMEKELMKKLQEELKEERASLEQAVHELSLLQEEFDIKSAEFNKKSALLDIKESELVDARLEIQHLKSEKASLLVLLEEKDLELSNARKMLAELNQEISDLKMLMNNKETQLIEATNMLREKDEHVKMIQNKLNNTSLKAFEAETVVERVLDLTNELVASIKNEEINSSRPLDEMGDQLMTQLMEDPTNELSWQQKRLENALELTKENLKTKEMEVLAAQRALTIKEEELKMTLARLEAKEEELRGAKDKATEDANDHNMLYAMMQERLDENNMEDLAIEKLQLEAAQLEVEAATSALQKIAEMSQQLLNKAMPSVKADSYISAMQNNNDIKLDLITNINCIDCLAVVKAGVARLSALTEQLVMDAGLPAAS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00687 769 Coils Coil 474 508 - -
Tsu01g00687 769 Coils Coil 261 284 - -
Tsu01g00687 769 Coils Coil 75 95 - -
Tsu01g00687 769 Coils Coil 592 654 - -
Tsu01g00687 769 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 35 764 - -
Tsu01g00687 769 Coils Coil 229 256 - -
Tsu01g00687 769 Coils Coil 334 431 - -
Tsu01g00687 769 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 35 764 - -
Tsu01g00687 769 Coils Coil 446 466 - -
Tsu01g00687 769 Coils Coil 669 701 - -
Tsu01g00687 769 Coils Coil 124 172 - -
Tsu01g00687 769 Coils Coil 292 312 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00687 - - gmx:100789623 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00687 01 6043240 6046637 Tsu01g00687 01 6043240 6046637 ECH