Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00673 ATGGATACATTGCCGACGACATCCACGGCGGCGAAGCGAGGAGGAGGAAGATCCAAAGTCGTTCAAACTTCAAAACCTTCTCTCCTCTTAGCCTTCTTGTCTTGTGTTGCTTGGCTTTACGTCGCCGGCAGGTTATGGCAAGATGCTGAGAATCGAAATTTACTTGCTACTCttctcaagaagaattcagCACAGagACCTAAGGTTCTTACGGTGGAAGATAAGTTAATGGTACTAGGGTGCAGGGATCTGGAGAAGAGGATTGTGGAAGCTGAGATGGAATTGACATTGGCCAAGAGTCAAGGGTACCTCAAAGGCCAACGTCTGCAAACCGCCTCTTCTTCTGACCGCAGGCTTCTTGCTGTTATTGGAGTGTATACTGGTTTCGGAAGCCGATTGAAAAGGAATGTATTCAGAGGGTCTTGGATGCCTAAAGGCGATGCCTTGAAAAAACTAGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTCCTAATCAAGGTGATAGCTTGGATCGCAATATTGATGAGGAAAACCGCTCAACAAAGGATTTCTTGATTCTTgAAAGTCACGAAGAAGCTCAAGAAGAGTTGCCtaaaaaagcaaaaatcttCTTTAGTACCGCCGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGTTTAATTGCACTTCTTGACCGTCGACGTGGCCAGGATGGCGCATATATTGGATGCATGAAGTCAGGAGATGTGATATCAGAAGAGGGAAAACTTTGGTATGAACCTGATTGGTGGAAATTTGGGGATGAAAAATCGTATTTCCGACATGCAGCTGGTTCACTTGTTATACTTTCAAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGACACGTCATTGGGATCATGGATGATGGGAATCCAATCAACATATATTGACGACAGTCGCCTTTGCTGCAGTAGCGTCAGCCAAGATAAGCTATGCTCGGTAGCTTGA 1041 0.4284 MDTLPTTSTAAKRGGGRSKVVQTSKPSLLLAFLSCVAWLYVAGRLWQDAENRNLLATLLKKNSAQRPKVLTVEDKLMVLGCRDLEKRIVEAEMELTLAKSQGYLKGQRLQTASSSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPKGDALKKLEERGVVIRFVIGRSPNQGDSLDRNIDEENRSTKDFLILESHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIALLDRRRGQDGAYIGCMKSGDVISEEGKLWYEPDWWKFGDEKSYFRHAAGSLVILSKNLAQYININSVSLKTYAYDDTSLGSWMMGIQSTYIDDSRLCCSSVSQDKLCSVA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00673 346 Pfam Galactosyltransferase 134 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu01g00673 346 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu01g00673 346 Coils Coil 81 101 - -
Tsu01g00673 346 Pfam Domain of unknown function (DUF4094) 24 101 IPR025298 -
Tsu01g00673 346 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 341 - -
Tsu01g00673 346 Gene3D - 150 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00673 Tsu-Chr1 5951557 5958038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00673 77 346 Glycosyltransferase AT2G25300 78.889 2.66e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00673 K20854 - gmx:100816327 623.624