Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00663 ATGGAACCAGAAGTAAGCATCGAAGGATCGTCGATGATCCAAATCGCCGTCATTCCAATCGGAACAGTACCACCCAACGTCCTCCGTGACTACTACTCAATGCTCCTCCCTCTCCACACGATTCCTCTCTCCGCAATCAGTTCCTTCTACACTGAACACCAGAAATCACCTTTCGCAAATCAACCTTGGGATTCCGGTTCAATCCGGTTCAAATTTGTCCTCGGAGGTTCTACTCCAAGTCCATGGGAAGATTTTCAATCTCACCGTAAAACCCTCGCTGTTGTTGGCATTGTTCATTGTCCTTCTTCGCCGGATCTTGATGCTGTTATCGATCAATTCTCAAATTCTTGTAAATCTTATCCTTCTTCACTTGTTGATCGTTGTTTCGCTTTTTACCCTAACGATTCTCAGCTTGATGATGGAAGTAAGAGAGATGGAAATTTGAGATTGTTTCCGCCTGCCGATCGGTCGACATTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCGTTGTTGATGGAGTTTGAGAAGTGGGTGCTTCAAGCGGAATCTTCTGGAACTATTCTCAAGACGCCTTTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAAAGGAGACTTGGGCGTGCTCAGAAGACGATTGGTGATTACTGCTTGCTAGCAGGTTCTCCTGTTGATGCTAATGCTCATTATTCCACTGCATTAGAACTTAGCAGGTTGACTGGGGATTTCTTTTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCtgATCGACCGTATGGGCCAGAAAGATTCAGGCGTGGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGCATTACAAGAAGTCACAAGATAATACTCAGCGAGTTTCTCCCATAGCTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTCTGCAGGAGAGAGCTGGCCAGGGAGGTAGTGGAGTTATTAACCACAGCTGCAGATGGGGCTAAATCTTTAATTGATGCAAGCGATCGACTCATATTATACATTGAAATAGCTCGTTTGTATGGCAGTCTTGGATACCAGAGAAAAGCCGCTTTCTTTTCAAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACTAAAGCTTATCATGTTCAAAGTAGATCATCAATCTCCGATCATCCTATTCATAATAAGGGAATTGGATCAGATAAAACTGATGCTGGGAAAATATATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGATCCTCTTACTGCATGGAGTGCAGCGGCACGCCTACTTAGGTCCTACTATCCTCTAATAACTCCTGCTGGGCAAAATGGTCTTGCTAATGCACTTTTGAATTCGTCTGAGAGGCTACCACCAGGGACTCGTTGTGCTGATCCCGCTTTACCTTTTATAAGGGTGCATTCCTTTCCTGTCCACCCAACACAAATGGACATTGTAAAACGGAATCCTGCTAGAGAAGACTGGTGGGCGGGTGCTGCTCCTTCAGGCCCTTTCATTTACACTCCATTCAGTAAAGGAGATACAAATAATATCAAGAAGCAAGAGCTTATTTGGATTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCGTGTGGCTTTGATTTAAGAGTTGATAGCATCTATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTCTACCAAATTCTTCAAAAGTGATTACCTTATCTGGTATTCCAACATCAGTGGGTCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATAACCGAACACCTGTTTAGAGAGGTTGACAATCTGCTTCTTGGGGCTGCACAAGGGCTTGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCAAAGTTGAAGAATGTAGCTGTTCCAAGTATTTCTGTAGTACCACCCCTTCCATTGCTGATATCACATATTGTTGGAGGTGATGGGGCCATCATTTTGTACGAAGGAGAAATTCGTGATGTGTGGATAAGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCTGGCACATATTTCACTGTCAGGGAAAAATCAAGATTCCGTGATTTCATATTCTTCTGAAACATTAAAATCCAGCCTCCCTCTAAGGCCTGGAGCAGAAGTGACATTCCCAGTGACTCTGCGAGCCTGGCAGGTTGGCGTGGCAGATGCTGATAATACGAGGCATTCCAAAGATGGAAGTTGCCCATCGCTATTGATCCATTACGCCGGTCCACTAAAAACCTCTGAAGACCCAAATGCTGTATCCCCCGGTAGACGCCTTGTTGTTCCTCTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTGAAGGCTCAATTGCTTTCGATGGAATTTCCTGCTCATGTTAGTGAAAGTCTTCCCAAGTTAGATGATGTAAATAATAATTCTACCGGAGGACATGTTAACTCAGAGTCAAAAATGGACAGATTGGTGAAAATAGACCCTTTCAGAGGAAGCTGGGGACTGCGGTTTCTAGAACTTGAGCTGTCAAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAAAACGGCAGTAATGAGGACAACCATTTAGCTGATCAGGATGCTACAGAATATGGTTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCAAGGGTTCTTGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGATTCCTTTTTATCGAAGGACACTCAGACAGATGGGAGTGGTGGAGGAAGAAATACGTCATTCTCTGAAAAGAACAGCAAAGCCGAACTCAATGCTTGTATCAAGAACCTTGTATCTAGGATTAAGGTTCAATGGCATTCGGGACGCAATAGCTCTGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAGTCATGGACGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTCTTAGAGAGGGTTTTGAATCAGATAGTCCTGACCCTGTTAAAGAATCTGATTTACCAGAATCCCCTGCTTCAAAAAGTTCCGTTCTTGCACATGAAATGACACCAATGGTAGTTGTGGTCCGTAATAACACAAAGGATATGATCaaaattaatcttaatattaCATGCAGAGATGTATCTGGGGAGAACTGTGTAGATGGTACCAAATCAACTGTTCTATGGACTGgTGTTTTGAGTGAAATTACCATTGAAATTCCCCCACTTCAACAAATCCAACATTCTTTCTGCTTGCATTTCCTTGTCCCAGGAGAGTATACCCTACTTGCTGCAGCTGTGATCGATGATGCGAATGACATTCTTCGGGCTCGTGCTAGGGCAACTTCGGCTGCTGAGCCTATTTTTTGTCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATGCTTGA 3561 0.4344 MEPEVSIEGSSMIQIAVIPIGTVPPNVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFANQPWDSGSIRFKFVLGGSTPSPWEDFQSHRKTLAVVGIVHCPSSPDLDAVIDQFSNSCKSYPSSLVDRCFAFYPNDSQLDDGSKRDGNLRLFPPADRSTLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDFFWYAGALEGSVCALLIDRMGQKDSGVEEEVRYRYNSVILHYKKSQDNTQRVSPIAFELEATLKLARFLCRRELAREVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHPIHNKGIGSDKTDAGKIYHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALLNSSERLPPGTRCADPALPFIRVHSFPVHPTQMDIVKRNPAREDWWAGAAPSGPFIYTPFSKGDTNNIKKQELIWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVAVPSISVVPPLPLLISHIVGGDGAIILYEGEIRDVWISLANAGTVPIELAHISLSGKNQDSVISYSSETLKSSLPLRPGAEVTFPVTLRAWQVGVADADNTRHSKDGSCPSLLIHYAGPLKTSEDPNAVSPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSESLPKLDDVNNNSTGGHVNSESKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENGSNEDNHLADQDATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLSKDTQTDGSGGGRNTSFSEKNSKAELNACIKNLVSRIKVQWHSGRNSSGELNIKDAIQAALQTSVMDVLLPDPLTFGFRLLREGFESDSPDPVKESDLPESPASKSSVLAHEMTPMVVVVRNNTKDMIKINLNITCRDVSGENCVDGTKSTVLWTGVLSEITIEIPPLQQIQHSFCLHFLVPGEYTLLAAAVIDDANDILRARARATSAAEPIFCRGPPYHLRVLGNA 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00663 1186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1184 IPR013935 -
Tsu01g00663 1186 MobiDBLite consensus disorder prediction 1044 1064 - -
Tsu01g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 190 IPR013935 -
Tsu01g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 273 IPR013935 -
Tsu01g00663 1186 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 328 743 IPR013935 -
Tsu01g00663 1186 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1184 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00663 K20306 - gmx:100784850 2108.95